Annotation Detail for TNFAIP2

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Basic Information Top

Gene Symbol:	TNFAIP2 ( B94 )
Gene Full Name:	tumor necrosis factor, alpha-induced protein 2
Band:	14q32
Quick Links	Entrez ID:7127; OMIM: 603300; Uniprot ID:TNAP2_HUMAN; ENSEMBL ID: ENSG00000185215; HGNC ID: 11895
Relate to Another Database:	SFARIGene; denovo-db

Post Translation Modification

No data

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	G2	GSE9613	102659183	102659547	364	3052
CTCF	G2	GSE9613	102659882	102660274	392	2339
NFkBII	GM12878	GSE19485	102657967	102659301	1334	3783
STAT1	HeLa	GSE12782	102653766	102655452	1686	7808
STAT1	HeLa	GSE12783	102653873	102655472	1599	7744
hScc1	Bcell	GSE12603	102658681	102659402	721	3375
hScc1	Bcell	GSE12603	102659701	102660236	535	2448
p130	shRbQuiescent	GSE19898	102659774	102660181	407	2439

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	Jurkat	GSE12889	102677383	102677580	197	3953
CTCF	G2	GSE9613	102675025	102675225	200	1597
CTCF	G2	GSE9613	102691377	102691790	413	18055
NFkBII	GM10847	GSE19485	102675996	102677972	1976	3456
NFkBII	GM12878	GSE19485	102675803	102678143	2340	3445
NFkBII	GM12892	GSE19485	102675679	102678059	2380	3341
NFkBII	GM18526	GSE19485	102676050	102678069	2019	3531
Oct1	Hela	GSE14283	102682125	102682168	43	8618
RARA	MCF7	GSE15244	102691341	102691790	449	18037
RNAII	Tamoxifen-MCF7	GSE14664	102687976	102688052	76	14486
TFAP2C	MCF7	GSE21234	102691147	102691535	388	17813
TFAP2C	MCF7	GSE21234	102692610	102693383	773	19468
hScc1	Bcell	GSE12603	102674474	102675129	655	1273
hScc1	Bcell	GSE12603	102677081	102677617	536	3821
hScc1	Bcell	GSE12603	102691414	102692127	713	18242
hScc1	CdLS	GSE12603	102677151	102677829	678	3962

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length
CTCF	G2	GSE9613	102662546	102663144	598
CTCF	G2	GSE9613	102665643	102666488	845
CTCF	G2	GSE9613	102666907	102667267	360
CTCF	G2	GSE9613	102668805	102668978	173
Fos	K562	GSE19551	102672625	102673526	901
RARG	MCF7	GSE15244	102667052	102667565	513
TFAP2C	MCF7	GSE21234	102665710	102666549	839
TFAP2C	MCF7	GSE21234	102666560	102667710	1150
hScc1	Bcell	GSE12603	102667832	102668195	363
hScc1	Bcell	GSE12603	102669542	102669886	344

Validated miRNA targets

Micro RNA Name	Stem Loop Name	The chromosome that miRNA located	Publication
hsa-let-7b	hsa-let-7b	22	18668040
hsa-let-7b*	hsa-let-7b	22	18668040
hsa-miR-1	hsa-mir-1-2	18	18668040
hsa-miR-1	hsa-mir-1-1	20	18668040
hsa-miR-155	hsa-mir-155	21	18668040
hsa-miR-155*	hsa-mir-155	21	18668040
hsa-miR-16	hsa-mir-16-1	13	18668040
hsa-miR-16	hsa-mir-16-2	3	18668040
hsa-miR-30a	hsa-mir-30a	6	18668040
hsa-miR-30a*	hsa-mir-30a	6	18668040
hsa-miR-30b	hsa-mir-30b	8	18668040
hsa-miR-30b*	hsa-mir-30b	8	18668040
hsa-miR-30c	hsa-mir-30c-2	6	18668040
hsa-miR-30c	hsa-mir-30c-1	1	18668040
hsa-miR-30c-1*	hsa-mir-30c-1	1	18668040
hsa-miR-30c-2*	hsa-mir-30c-2	6	18668040
hsa-miR-30d	hsa-mir-30d	8	18668040
hsa-miR-30d*	hsa-mir-30d	8	18668040
hsa-miR-30e	hsa-mir-30e	1	18668040
hsa-miR-30e*	hsa-mir-30e	1	18668040

ID in Tarbase	Data Type	Support Type	miRNA	Gene	Direct Support	Publication
1298	Unknown	pSILAC	miR-30	TNFAIP2	down 50-25%	18668040
Ensembl	Protein Type	Differentially expressed in	Pathology or Event	Mis Regulation	Gene Expression	Tumour Involvement
ENSG00000185215		n_a	n_a	n_a	"epithelium, lymphocyte, leukocyte, muscle cell"	"benign tumour, malignant tumour, carcinoma, leukaemia, sarcoma"

Cis-Nats regulation

Simple Query:

Paper Collected: 6/30/2018

Last Update: 8/26/2018