AutismKB 2.0

Annotation Detail for TNFRSF1A


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Basic Information Top
Gene Symbol:TNFRSF1A ( CD120a,FPF,MGC19588,TBP1,TNF-R,TNF-R-I,TNF-R55,TNFAR,TNFR1,TNFR55,TNFR60,p55,p55-R,p60 )
Gene Full Name: tumor necrosis factor receptor superfamily, member 1A
Band: 12p13.31
Quick LinksEntrez ID:7132; OMIM: 191190; Uniprot ID:TNR1A_HUMAN; ENSEMBL ID: ENSG00000067182; HGNC ID: 11916
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
54N-linked (GlcNAc...) (Potential).
145N-linked (GlcNAc...) (Potential).
151N-linked (GlcNAc...) (Potential).
Location(AA) Modifications Resource
54N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
145N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
151N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
Location(AA) Modification Resource
42Phosphoserine(IKK)HMM predict
54N-linkedHMM predict
55N-linkedHMM predict
145N-linkedHMM predict
151N-linkedHMM predict
195S-palmitoylHMM predict
223S-palmitoylHMM predict
252Phosphothreonine(CDK)HMM predict
270N-linkedHMM predict
272O-linkedHMM predict
274Phosphoserine(CDC2)HMM predict
276O-linkedHMM predict
276O-linkedHMM predict
282O-linkedHMM predict
286Phosphoserine(CDC2)HMM predict
286O-linkedHMM predict
290O-linkedHMM predict
292O-linkedHMM predict
297O-linkedHMM predict
299Phosphotyrosine(INSR)HMM predict
300O-linkedHMM predict
360Phosphotyrosine(Abl)HMM predict
381Phosphoserine(ATM)HMM predict
401Phosphotyrosine(SRC)HMM predict
402Phosphoserine(IKK)HMM predict
411Phosphothreonine(CDK)HMM predict
411Phosphothreonine(MAPK)HMM predict
411Phosphothreonine(CDC2)HMM predict
411Phosphothreonine(PKA)HMM predict
417Phosphothreonine(PKA)HMM predict
437IsoleucineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_001065
  • Location:chr12 6308184-6321521
  • strand:-
No data
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP JurkatGSE17954 6314241 6318431 4190 0
CTCF CD4GSE12889 6315040 6315397 357 0
CTCF CD4SISSRdata 6315040 6315397 357 0
CTCF G2GSE9613 6308515 6309228 713 0
CTCF G2GSE9613 6312964 6313295 331 0
CTCF G2GSE9613 6314830 6315497 667 0
CTCF G2GSE9613 6316241 6316785 544 0
CTCF G2GSE9613 6319625 6320105 480 0
CTCF G2GSE9613 6320426 6321691 1265 0
H3K4me3 colorectalcancer 6318945 6320461 1516 0
H3ac HepG2E 6313608 6313896 288 0
H3ac HepG2E 6314253 6314830 577 0
H3ac HepG2E 6315260 6317970 2710 0
H3ac HepG2E 6318368 6322400 4032 0
NRSF pAbJurkat 6313115 6313678 563 0
NRSF pAbJurkat 6320562 6321691 1129 0
RARA MCF7GSE15244 6318729 6319382 653 0
RARG MCF7GSE15244 6315150 6316196 1046 0
RARG MCF7GSE15244 6318729 6319058 329 0
Rb QuiescentGSE19898 6308390 6308532 142 0
Rb QuiescentGSE19898 6321361 6321651 290 0
TAF HelaGSE8489 6316929 6317658 729 0
TAF HelaGSE8489 6318368 6320461 2093 0
TFAP2C MCF7GSE21234 6315074 6316868 1794 0
USF1 HepG2E 6315150 6316381 1231 0
hScc1 BcellGSE12603 6308875 6309167 292 0
hScc1 BcellGSE12603 6315077 6315497 420 0
hScc1 BcellGSE12603 6315881 6316698 817 0
hScc1 G2GSE9613 6308515 6309228 713 0
hScc1 G2GSE9613 6314756 6315676 920 0
hScc1 G2GSE9613 6319625 6320140 515 0
p130 QuiescentGSE19898 6315392 6316240 848 0
p130 shRbQuiescentGSE19898 6321098 6321667 569 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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