AutismKB 2.0

Annotation Detail for TNXB


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Basic Information Top
Gene Symbol:TNXB ( HXBL,TENX,TN-X,TNX,TNXB1,TNXB2,TNXBS,XB,XBS )
Gene Full Name: tenascin XB
Band: 6p21.33-p21.32
Quick LinksEntrez ID:7148; OMIM: 600985; Uniprot ID:TENX_HUMAN; ENSEMBL ID: ENSG00000168477; HGNC ID: 11976
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
31N-linked (GlcNAc...) (Potential).
901N-linked (GlcNAc...).
930N-linked (GlcNAc...).
1331Phosphothreonine.
1332Phosphothreonine.
1417Phosphotyrosine.
1750Cell attachment site (Potential).
3738Phosphoserine.
3900N-linked (GlcNAc...) (Potential).
3953N-linked (GlcNAc...) (Potential).
3965N-linked (GlcNAc...).
4140N-linked (GlcNAc...) (Potential).
4226Phosphoserine.
Location(AA) Modifications Resource
31N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
901N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
930N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
3900N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
3953N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
3965N-linked (GlcNAc...).Swiss-Prot 53.0
4140N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
Location(AA) Modification Resource
27O-linkedHMM predict
31N-linkedHMM predict
54Phosphoserine(CDC2)HMM predict
57Phosphoserine(ATM)HMM predict
125S-palmitoylHMM predict
126S-palmitoylHMM predict
168Phosphoserine(ATM)HMM predict
178O-linkedHMM predict
179O-linkedHMM predict
179Phosphoserine(ATM)HMM predict
182Phosphoserine(IKK)HMM predict
186Phosphoserine(IKK)HMM predict
212O-linkedHMM predict
233S-palmitoylHMM predict
245Phosphoserine(ATM)HMM predict
621S-palmitoylHMM predict
686O-linkedHMM predict
768Phosphotyrosine(SRC)HMM predict
771Phosphothreonine(PKC)HMM predict
804Phosphothreonine(MAPK)HMM predict
869Phosphoserine(PKG)HMM predict
869Phosphoserine(CAMK2)HMM predict
869Phosphoserine(PKB)HMM predict
878Phosphothreonine(PKC)HMM predict
890O-linkedHMM predict
890O-linkedHMM predict
892O-linkedHMM predict
892Phosphoserine(ATM)HMM predict
901N-linkedHMM predict
930N-linkedHMM predict
998Phosphoserine(CAMK2)HMM predict
1020Phosphothreonine(PKC)HMM predict
1028O-linkedHMM predict
1029O-linkedHMM predict
1030O-linkedHMM predict
1033O-linkedHMM predict
1033O-linkedHMM predict
1035O-linkedHMM predict
1132SulfotyrosineHMM predict
1239Phosphoserine(ATM)HMM predict
1242O-linkedHMM predict
1242Phosphoserine(CDC2)HMM predict
1242Phosphoserine(CDK)HMM predict
1242Phosphoserine(ATM)HMM predict
1245Phosphothreonine(MAPK)HMM predict
1245Phosphothreonine(CDK)HMM predict
1258Phosphothreonine(MAPK)HMM predict
1360Phosphothreonine(MAPK)HMM predict
1443Phosphothreonine(CDC2)HMM predict
1443Phosphothreonine(MAPK)HMM predict
1443Phosphothreonine(CDK)HMM predict
1445Phosphoserine(CDC2)HMM predict
1445Phosphoserine(MAPK)HMM predict
1456Phosphoserine(ATM)HMM predict
1456Phosphoserine(IKK)HMM predict
1456PhosphoserineHMM predict
1470Phosphoserine(IKK)HMM predict
1471Phosphoserine(CDC2)HMM predict
1540O-linkedHMM predict
1552Phosphothreonine(MAPK)HMM predict
1556O-linkedHMM predict
1558Phosphoserine(IKK)HMM predict
1573Phosphothreonine(MAPK)HMM predict
1654O-linkedHMM predict
1671Phosphothreonine(MAPK)HMM predict
1737Phosphoserine(CDC2)HMM predict
1745Phosphothreonine(PKC)HMM predict
1768Phosphothreonine(MAPK)HMM predict
1809Phosphothreonine(PKC)HMM predict
1811Phosphothreonine(MAPK)HMM predict
1954O-linkedHMM predict
1955O-linkedHMM predict
2057O-linkedHMM predict
2061O-linkedHMM predict
2061O-linkedHMM predict
2063O-linkedHMM predict
2063O-linkedHMM predict
2063Phosphothreonine(CDC2)HMM predict
2081Phosphothreonine(MAPK)HMM predict
2084Phosphoserine(IKK)HMM predict
2086Phosphoserine(CK1)HMM predict
2145MethylarginineHMM predict
2178Phosphoserine(IKK)HMM predict
2179Phosphoserine(CDC2)HMM predict
2182Phosphoserine(IKK)HMM predict
2184Phosphoserine(CK1)HMM predict
2248O-linkedHMM predict
2259Phosphoserine(IKK)HMM predict
2283Phosphoserine(CK1)HMM predict
2347O-linkedHMM predict
2352O-linkedHMM predict
2354O-linkedHMM predict
2354O-linkedHMM predict
2359O-linkedHMM predict
2359O-linkedHMM predict
2377Phosphothreonine(MAPK)HMM predict
2380Phosphoserine(IKK)HMM predict
2382Phosphoserine(CK1)HMM predict
2455Phosphothreonine(MAPK)HMM predict
2457O-linkedHMM predict
2457Phosphoserine(CDC2)HMM predict
2457Phosphoserine(ATM)HMM predict
2457Phosphoserine(IKK)HMM predict
2482Phosphoserine(IKK)HMM predict
2483Phosphoserine(CDC2)HMM predict
2486Phosphoserine(IKK)HMM predict
2488Phosphoserine(CK1)HMM predict
2552O-linkedHMM predict
2566Phosphothreonine(CDC2)HMM predict
2566Phosphothreonine(MAPK)HMM predict
2566Phosphothreonine(CDK)HMM predict
2568O-linkedHMM predict
2568Phosphoserine(CDC2)HMM predict
2574O-linkedHMM predict
2574O-linkedHMM predict
2593Phosphoserine(IKK)HMM predict
2594Phosphoserine(CDC2)HMM predict
2597Phosphoserine(IKK)HMM predict
2599Phosphoserine(CK1)HMM predict
2636Phosphothreonine(PKC)HMM predict
2674O-linkedHMM predict
2680O-linkedHMM predict
2680O-linkedHMM predict
2682Phosphothreonine(CDC2)HMM predict
2682Phosphothreonine(MAPK)HMM predict
2700Phosphothreonine(MAPK)HMM predict
2703Phosphoserine(IKK)HMM predict
2705Phosphoserine(CK1)HMM predict
2778Phosphothreonine(MAPK)HMM predict
2780O-linkedHMM predict
2780Phosphoserine(CDC2)HMM predict
2780Phosphoserine(MAPK)HMM predict
2805Phosphoserine(IKK)HMM predict
2806Phosphoserine(CDC2)HMM predict
2809Phosphoserine(IKK)HMM predict
2811Phosphoserine(CK1)HMM predict
2813Phosphoserine(IKK)HMM predict
2875O-linkedHMM predict
2880O-linkedHMM predict
2883O-linkedHMM predict
2885O-linkedHMM predict
2903Phosphothreonine(MAPK)HMM predict
2906Phosphoserine(IKK)HMM predict
2908Phosphoserine(CK1)HMM predict
2981Phosphothreonine(MAPK)HMM predict
2988O-linkedHMM predict
2989O-linkedHMM predict
2989O-linkedHMM predict
3008Phosphoserine(IKK)HMM predict
3009Phosphoserine(CDC2)HMM predict
3012Phosphoserine(IKK)HMM predict
3014Phosphoserine(CK1)HMM predict
3016Phosphoserine(IKK)HMM predict
3078O-linkedHMM predict
3097O-linkedHMM predict
3097O-linkedHMM predict
3099Phosphothreonine(CDC2)HMM predict
3099Phosphothreonine(MAPK)HMM predict
3117Phosphothreonine(MAPK)HMM predict
3120Phosphoserine(IKK)HMM predict
3122Phosphoserine(CK1)HMM predict
3195Phosphothreonine(MAPK)HMM predict
3197O-linkedHMM predict
3197Phosphoserine(CDC2)HMM predict
3197Phosphoserine(ATM)HMM predict
3197Phosphoserine(IKK)HMM predict
3202O-linkedHMM predict
3203O-linkedHMM predict
3222Phosphoserine(IKK)HMM predict
3223Phosphoserine(CDC2)HMM predict
3226Phosphoserine(IKK)HMM predict
3228Phosphoserine(CK1)HMM predict
3292O-linkedHMM predict
3302O-linkedHMM predict
3302Phosphothreonine(MAPK)HMM predict
3319Phosphothreonine(PKC)HMM predict
3400Phosphoserine(CDC2)HMM predict
3412Phosphothreonine(MAPK)HMM predict
3507Phosphoserine(CK1)HMM predict
3508Phosphoserine(CK1)HMM predict
3586Phosphothreonine(CDC2)HMM predict
3586Phosphothreonine(MAPK)HMM predict
3613Phosphothreonine(CDC2)HMM predict
3613Phosphothreonine(MAPK)HMM predict
3620Phosphoserine(PKG)HMM predict
3695Phosphothreonine(PKC)HMM predict
3709O-linkedHMM predict
3738Phosphoserine(CDC2)HMM predict
3740O-linkedHMM predict
3798Phosphoserine(MAPK)HMM predict
3845Phosphoserine(ATM)HMM predict
3936Phosphothreonine(MAPK)HMM predict
3953N-linkedHMM predict
3965N-linkedHMM predict
3968Phosphoserine(CDC2)HMM predict
3971O-linkedHMM predict
3990Phosphothreonine(MAPK)HMM predict
4014Phosphothreonine(CDC2)HMM predict
4059O-linkedHMM predict
4060O-linkedHMM predict
4061Phosphoserine(IKK)HMM predict
4140N-linkedHMM predict
4222Phosphoserine(IKK)HMM predict
4284Phosphoserine(CDC2)HMM predict
4284Phosphoserine(CDK)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_019105
  • Location:chr6 32116910-32185130
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 32185487 32186051 564 639
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T30-glioblastomaGSE21026 32156824 32157318 494 0
CTCF CD4GSE12889 32123920 32124276 356 0
CTCF CD4GSE12889 32163416 32163600 184 0
CTCF CD4SISSRdata 32123920 32124276 356 0
CTCF CD4SISSRdata 32163416 32163600 184 0
CTCF JurkatGSE12889 32124000 32124218 218 0
CTCF G2GSE9613 32121757 32122797 1040 0
CTCF G2GSE9613 32123362 32125117 1755 0
CTCF G2GSE9613 32125759 32126023 264 0
CTCF G2GSE9613 32128338 32128619 281 0
CTCF G2GSE9613 32128921 32129259 338 0
CTCF G2GSE9613 32129524 32130040 516 0
CTCF G2GSE9613 32131550 32132419 869 0
CTCF G2GSE9613 32133120 32133440 320 0
CTCF G2GSE9613 32136839 32137422 583 0
CTCF G2GSE9613 32137871 32138128 257 0
CTCF G2GSE9613 32140386 32140607 221 0
CTCF G2GSE9613 32143117 32143583 466 0
CTCF G2GSE9613 32144153 32144324 171 0
CTCF G2GSE9613 32145714 32146915 1201 0
CTCF G2GSE9613 32149175 32149431 256 0
CTCF G2GSE9613 32152856 32152993 137 0
CTCF G2GSE9613 32154713 32155133 420 0
CTCF G2GSE9613 32156592 32157100 508 0
CTCF G2GSE9613 32162867 32163950 1083 0
CTCF G2GSE9613 32164204 32165196 992 0
CTCF G2GSE9613 32168491 32168710 219 0
CTCF G2GSE9613 32170667 32173335 2668 0
CTCF G2GSE9613 32182170 32182596 426 0
CTCF G2GSE9613 32183805 32184886 1081 0
H3ac HepG2E 32164094 32164376 282 0
NRSF JurkatGSE13047 32180873 32181728 855 0
NRSF JurkatSISSRdata 32181172 32181576 404 0
NRSF mAbJurkat 32179231 32179449 218 0
NRSF mAbJurkat 32179956 32180362 406 0
NRSF mAbJurkat 32180705 32181440 735 0
NRSF-mono JurkatQuESTdata 32181025 32181727 702 0
NRSF-poly JurkatQuESTdata 32181204 32181619 415 0
Oct1 H2O2-HelaGSE14283 32138791 32138823 32 0
Oct1 HelaGSE14283 32129980 32130049 69 0
Oct1 HelaGSE14283 32138784 32138827 43 0
Oct1 HelaGSE14283 32155876 32155906 30 0
P300 T30-glioblastomaGSE21026 32156551 32157479 928 0
P300 T30-glioblastomaGSE21026 32162105 32163017 912 0
Rb QuiescentGSE19898 32156889 32157279 390 0
Rb SenescentGSE19898 32124019 32124187 168 0
TFAP2C MCF7GSE21234 32122842 32123288 446 0
TFAP2C MCF7GSE21234 32158495 32159662 1167 0
hScc1 BcellGSE12603 32122436 32122797 361 0
hScc1 BcellGSE12603 32123901 32124482 581 0
hScc1 BcellGSE12603 32125678 32126723 1045 0
hScc1 BcellGSE12603 32129704 32130501 797 0
hScc1 BcellGSE12603 32132301 32133367 1066 0
hScc1 BcellGSE12603 32137048 32137309 261 0
hScc1 BcellGSE12603 32154742 32155059 317 0
hScc1 BcellGSE12603 32159707 32160072 365 0
hScc1 BcellGSE12603 32162946 32163625 679 0
hScc1 BcellGSE12603 32171122 32171480 358 0
hScc1 BcellGSE12603 32172160 32173072 912 0
hScc1 CdLSGSE12603 32163024 32163739 715 0
hScc1 G2GSE9613 32123362 32124998 1636 0
hScc1 G2GSE9613 32136839 32137243 404 0
hScc1 G2GSE9613 32155693 32155885 192 0
hScc1 G2GSE9613 32156760 32157123 363 0
hScc1 G2GSE9613 32163199 32164661 1462 0
p130 QuiescentGSE19898 32170326 32170625 299 0
p130 shRbQuiescentGSE19898 32157049 32157471 422 0
p130 shRbSenescentGSE19898 32156839 32157253 414 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
22438 mRNA CYP21A2 chr6 32114060 32117396 296 mRNA TNXB chr6 32116910 32185131Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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