Annotation Detail for TPBG
Basic Information Top
| Gene Symbol: | TPBG ( 5T4,5T4AG,M6P1 ) |
|---|---|
| Gene Full Name: | trophoblast glycoprotein |
| Band: | 6q14.1 |
| Quick Links | Entrez ID:7162; OMIM: 190920; Uniprot ID:TPBG_HUMAN; ENSEMBL ID: ENSG00000146242; HGNC ID: 12004 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 81 | N-linked (GlcNAc...) (Potential). | |
| 124 | N-linked (GlcNAc...). | |
| 275 | N-linked (GlcNAc...) (Potential). | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 81 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 124 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 275 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 31 | O-linked | HMM predict |
| 32 | O-linked | HMM predict |
| 33 | Phosphoserine(CDC2) | HMM predict |
| 35 | O-linked | HMM predict |
| 35 | O-linked | HMM predict |
| 36 | Phosphoserine(IKK) | HMM predict |
| 40 | Phosphoserine(IKK) | HMM predict |
| 42 | Phosphoserine(CK1) | HMM predict |
| 44 | O-linked | HMM predict |
| 74 | Phosphothreonine(PKC) | HMM predict |
| 81 | N-linked | HMM predict |
| 124 | N-linked | HMM predict |
| 168 | Phosphoserine(CAMK2) | HMM predict |
| 170 | O-linked | HMM predict |
| 170 | O-linked | HMM predict |
| 173 | Phosphoserine(CDC2) | HMM predict |
| 173 | Phosphoserine(MAPK) | HMM predict |
| 243 | N-linked | HMM predict |
| 244 | N-linked | HMM predict |
| 256 | N-linked | HMM predict |
| 275 | N-linked | HMM predict |
| 413 | N-linked | HMM predict |
- RefSeq ID: NM_006670
- Location:chr6 83130257-83133332
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 83129758 | 83130486 | 728 | 136 |
| Oct1 | H2O2-Hela | GSE14283 | 83112712 | 83112745 | 33 | 17529 |
| Oct1 | Hela | GSE14283 | 83112710 | 83112746 | 36 | 17530 |
| Rb | Quiescent | GSE19898 | 83129683 | 83129798 | 115 | 517 |
| Rb | Senescent | GSE19898 | 83129437 | 83130074 | 637 | 502 |
| Stat6 | IL-4-hr4 | GSE17850 | 83114164 | 83114730 | 566 | 15811 |
| TFAP2C | MCF7 | GSE21234 | 83127950 | 83128460 | 510 | 2053 |
| hScc1 | Bcell | GSE12603 | 83129871 | 83130344 | 473 | 150 |
| hScc1 | CdLS | GSE12603 | 83129672 | 83130203 | 531 | 320 |
| p130 | Quiescent | GSE19898 | 83129584 | 83129886 | 302 | 523 |
| p130 | Senescent | GSE19898 | 83129221 | 83130006 | 785 | 644 |
| p130 | shRbQuiescent | GSE19898 | 83129078 | 83129929 | 851 | 754 |
| p130 | shRbSenescent | GSE19898 | 83129474 | 83129978 | 504 | 532 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| ER | E2-MCF7 | GSE14664 | 83135575 | 83135609 | 34 | 2260 |
| ER | E2-MCF7 | GSE14664 | 83147449 | 83147496 | 47 | 14140 |
| ER | E2-MCF7 | GSE14664 | 83147885 | 83147922 | 37 | 14571 |
| Oct1 | Hela | GSE14283 | 83147455 | 83147485 | 30 | 14138 |
| Oct1 | Hela | GSE14283 | 83147884 | 83147922 | 38 | 14571 |
| TFAP2C | MCF7 | GSE21234 | 83152342 | 83152846 | 504 | 19262 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 83130935 | 83132416 | 1481 | 0 |
| ER | MCF7 | GSE19013 | 83130941 | 83131323 | 382 | 0 |
| H3K4me3 | colorectal | cancer | 83132299 | 83132670 | 371 | 0 |
| TFAP2C | MCF7 | GSE21234 | 83132003 | 83132441 | 438 | 0 |
| hScc1 | Bcell | GSE12603 | 83131034 | 83132167 | 1133 | 0 |
| hScc1 | G2 | GSE9613 | 83130968 | 83131852 | 884 | 0 |
| p130 | shRbQuiescent | GSE19898 | 83130637 | 83131175 | 538 | 0 |
Validated miRNA targets