AutismKB 2.0

Annotation Detail for TPD52L1


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Basic Information Top
Gene Symbol:TPD52L1 ( D53,MGC8556,TPD52L2,hD53 )
Gene Full Name: tumor protein D52-like 1
Band: 6q22-q23
Quick LinksEntrez ID:7164; OMIM: 604069; Uniprot ID:TPD53_HUMAN; ENSEMBL ID: ENSG00000111907; HGNC ID: 12006
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
149Phosphoserine.
Location(AA) Modifications Resource
Location(AA) Modification Resource
52Phosphothreonine(PKC)HMM predict
82N-linkedHMM predict
84Phosphoserine(CK1)HMM predict
115O-linkedHMM predict
160O-linkedHMM predict
180Phosphoserine(CK1)HMM predict
186O-linkedHMM predict
197Phosphothreonine(PKC)HMM predict
197Phosphothreonine(CK2)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_001003395
  • Location:chr6 125517118-125626342
  • strand:+
No data
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 125555211 125555476 265 0
CTCF CD4SISSRdata 125555211 125555476 265 0
CTCF G2GSE9613 125555131 125556026 895 0
ER E2-MCF7GSE14664 125608192 125608288 96 0
ER Fulvestrant-MCF7GSE14664 125576908 125576946 38 0
ER MCF7GSE19013 125517295 125518259 964 0
ER MCF7GSE19013 125560446 125561304 858 0
ER MCF7GSE19013 125564865 125565708 843 0
ER MCF7GSE19013 125567791 125568499 708 0
FOXA1 MCF7GSE15244 125567873 125568480 607 0
FoxA1 MCF7MACSdata 125567936 125568096 160 0
Gata2 K562GSE18868 125555121 125555819 698 0
Myc K562GSE19551 125537495 125537823 328 0
Myc K562GSE19551 125555150 125555595 445 0
Oct1 H2O2-HelaGSE14283 125583642 125583714 72 0
Oct1 HelaGSE14283 125567505 125567539 34 0
Oct1 HelaGSE14283 125576907 125576988 81 0
Oct1 HelaGSE14283 125583637 125583728 91 0
RARA MCF7GSE15244 125517463 125518966 1503 0
RARA MCF7GSE15244 125558279 125559016 737 0
RARA MCF7GSE15244 125560344 125561450 1106 0
RARA MCF7GSE15244 125564620 125565577 957 0
RARA MCF7GSE15244 125566407 125567228 821 0
RARA MCF7GSE15244 125567873 125568866 993 0
RARA MCF7GSE15244 125594405 125595535 1130 0
RARA MCF7GSE15244 125616965 125618378 1413 0
RARG MCF7GSE15244 125558279 125559016 737 0
RARG MCF7GSE15244 125560416 125561450 1034 0
RARG MCF7GSE15244 125564620 125565454 834 0
RNAII Tamoxifen-MCF7GSE14664 125533538 125533635 97 0
Stat6 IL-4-hr1GSE17850 125554879 125555391 512 0
TFAP2C MCF7GSE21234 125558267 125558784 517 0
TFAP2C MCF7GSE21234 125564993 125565413 420 0
TFAP2C MCF7GSE21234 125608147 125609146 999 0
hScc1 BcellGSE12603 125555354 125555708 354 0
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-miR-122 hsa-mir-122 18 19296470
hsa-miR-122 hsa-mir-122 18 19296470
hsa-miR-122* hsa-mir-122 18 19296470
hsa-miR-122* hsa-mir-122 18 19296470
No data
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
23131 mRNA TPD52L1 chr6 125517118 125626343 448 EST chr6 125625894 125626536Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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