AutismKB 2.0

Annotation Detail for TRO


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:TRO ( KIAA1114,MAGE-d3,MAGED3 )
Gene Full Name: trophinin
Band: Xp11.21
Quick LinksEntrez ID:7216; OMIM: 300132; Uniprot ID:TROP_HUMAN; ENSEMBL ID: ENSG00000067445; HGNC ID: 12326
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
27Phosphothreonine(PKC)HMM predict
72O-linkedHMM predict
81O-linkedHMM predict
83O-linkedHMM predict
83O-linkedHMM predict
86O-linkedHMM predict
87Phosphoserine(IKK)HMM predict
109O-linkedHMM predict
109Phosphoserine(ATM)HMM predict
109Phosphoserine(IKK)HMM predict
111Phosphoserine(CDC2)HMM predict
135Phosphoserine(ATM)HMM predict
144N-linkedHMM predict
149Phosphoserine(ATM)HMM predict
179O-linkedHMM predict
187O-linkedHMM predict
196N-linkedHMM predict
203O-linkedHMM predict
210Phosphothreonine(PKC)HMM predict
219Phosphothreonine(PKC)HMM predict
235N-linkedHMM predict
237O-linkedHMM predict
270Phosphoserine(CK2)HMM predict
304Phosphothreonine(PKC)HMM predict
311Phosphoserine(ATM)HMM predict
311Phosphoserine(IKK)HMM predict
313Phosphothreonine(MAPK)HMM predict
382Phosphotyrosine(EGFR)HMM predict
467Phosphotyrosine(INSR)HMM predict
684Phosphoserine(PKB)HMM predict
704O-linkedHMM predict
704O-linkedHMM predict
722O-linkedHMM predict
724Phosphoserine(IKK)HMM predict
728O-linkedHMM predict
736O-linkedHMM predict
739O-linkedHMM predict
740O-linkedHMM predict
758O-linkedHMM predict
760Phosphoserine(IKK)HMM predict
762Phosphoserine(CK1)HMM predict
776O-linkedHMM predict
780O-linkedHMM predict
780Phosphoserine(ATM)HMM predict
786Phosphoserine(IKK)HMM predict
788O-linkedHMM predict
788O-linkedHMM predict
788Phosphoserine(CK1)HMM predict
788Phosphoserine(ATM)HMM predict
792Phosphoserine(IKK)HMM predict
793O-linkedHMM predict
796O-linkedHMM predict
798O-linkedHMM predict
808O-linkedHMM predict
812O-linkedHMM predict
816O-linkedHMM predict
816O-linkedHMM predict
822O-linkedHMM predict
827O-linkedHMM predict
831O-linkedHMM predict
832O-linkedHMM predict
832O-linkedHMM predict
832O-linkedHMM predict
833O-linkedHMM predict
836O-linkedHMM predict
840Phosphoserine(CK1)HMM predict
841O-linkedHMM predict
862O-linkedHMM predict
864Phosphoserine(IKK)HMM predict
882O-linkedHMM predict
888O-linkedHMM predict
894Phosphoserine(IKK)HMM predict
937O-linkedHMM predict
937Phosphoserine(IKK)HMM predict
968O-linkedHMM predict
972O-linkedHMM predict
1008O-linkedHMM predict
1012O-linkedHMM predict
1034O-linkedHMM predict
1036O-linkedHMM predict
1036Phosphoserine(ATM)HMM predict
1078Phosphothreonine(MAPK)HMM predict
1090O-linkedHMM predict
1092O-linkedHMM predict
1130O-linkedHMM predict
1136O-linkedHMM predict
1186O-linkedHMM predict
1212O-linkedHMM predict
1226O-linkedHMM predict
1257O-linkedHMM predict
1266O-linkedHMM predict
1297Phosphoserine(IKK)HMM predict
1299O-linkedHMM predict
1300O-linkedHMM predict
1308O-linkedHMM predict
1310O-linkedHMM predict
1314O-linkedHMM predict
1324O-linkedHMM predict
1335O-linkedHMM predict
1340O-linkedHMM predict
1343O-linkedHMM predict
1369O-linkedHMM predict
1374O-linkedHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_001039705
  • Location:chrX 54963973-54974585
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
TAFII hESGSE17917 54963686 54964118 432 72
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 54965986 54966410 424 0
CTCF G2GSE9613 54970607 54971019 412 0
CTCF G2GSE9613 54972834 54973159 325 0
CTCF G2GSE9613 54973875 54974148 273 0
p130 SenescentGSE19898 54964818 54965089 271 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
27702 mRNA TRO chrX 54830269 54840885 108 HTC chrX 54837483 54839401Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


Copyright © 2017, Center for Bioinformatics , Peking University | All Rights Reserved