AutismKB 2.0

Annotation Detail for TSSC1


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Basic Information Top
Gene Symbol:TSSC1 ( - )
Gene Full Name: tumor suppressing subtransferable candidate 1
Band: 2p25.3
Quick LinksEntrez ID:7260; OMIM: 608998; Uniprot ID:TSSC1_HUMAN; ENSEMBL ID: ENSG00000032389; HGNC ID:
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
320Phosphoserine.
Location(AA) Modifications Resource
Location(AA) Modification Resource
19Phosphothreonine(MAPK)HMM predict
85N-linkedHMM predict
90O-linkedHMM predict
112Phosphoserine(ATM)HMM predict
116Phosphoserine(CK1)HMM predict
117Phosphoserine(IKK)HMM predict
117Phosphoserine(CK1)HMM predict
118Phosphoserine(CK1)HMM predict
169Phosphoserine(ATM)HMM predict
197N-linkedHMM predict
205N-linkedHMM predict
260N-linkedHMM predict
267PhosphothreonineHMM predict
281N-linkedHMM predict
295O-linkedHMM predict
320Phosphoserine(ATM)HMM predict
320Phosphoserine(CK2)HMM predict
327Phosphoserine(CK1)HMM predict
349Phosphoserine(CK1)HMM predict
356Phosphoserine(IKK)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_003310
  • Location:chr2 3171749-3360604
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ETS1 JurkatGSE17954 3359981 3361499 1518 136
Fos K562GSE19551 3360326 3360980 654 49
GABP k562GSE8489 3360886 3361622 736 650
PHF8 293TGSE20725 3360084 3361421 1337 148
PHF8 HeLaGSE20725 3360234 3361145 911 85
PHF8 Hs68minusFBSGSE20725 3360349 3361414 1065 277
TAF k562GSE8489 3361163 3361622 459 788
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 3162173 3162364 191 9481
CTCF CD4SISSRdata 3162173 3162364 191 9481
CTCF G2GSE9613 3153431 3153989 558 18040
CTCF G2GSE9613 3158024 3158282 258 13597
CTCF G2GSE9613 3159441 3159742 301 12158
CTCF G2GSE9613 3161320 3162345 1025 9917
CTCF G2GSE9613 3162894 3164556 1662 8025
CTCF G2GSE9613 3166708 3167051 343 4870
CTCF G2GSE9613 3171351 3171741 390 204
GABP k562GSE8489 3163160 3164451 1291 7944
HIF1 HypoHepG2 3163198 3164236 1038 8033
Oct1 HelaGSE14283 3155901 3155928 27 15835
SRF k562GSE8489 3163268 3164309 1041 7961
c MYCMCF7 3163124 3164416 1292 7980
hScc1 BcellGSE12603 3159330 3159778 448 12196
hScc1 BcellGSE12603 3163198 3164344 1146 7979
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 3180985 3181151 166 0
CTCF CD4GSE12889 3286378 3286679 301 0
CTCF CD4SISSRdata 3180985 3181151 166 0
CTCF CD4SISSRdata 3286378 3286679 301 0
CTCF G2GSE9613 3172067 3172537 470 0
CTCF G2GSE9613 3173298 3173566 268 0
CTCF G2GSE9613 3175731 3176005 274 0
CTCF G2GSE9613 3180712 3181272 560 0
CTCF G2GSE9613 3182303 3182780 477 0
CTCF G2GSE9613 3183387 3183814 427 0
CTCF G2GSE9613 3187623 3188154 531 0
CTCF G2GSE9613 3188903 3189112 209 0
CTCF G2GSE9613 3197954 3198169 215 0
CTCF G2GSE9613 3218897 3219389 492 0
CTCF G2GSE9613 3221657 3222028 371 0
CTCF G2GSE9613 3222568 3223888 1320 0
CTCF G2GSE9613 3224750 3225330 580 0
CTCF G2GSE9613 3226516 3226764 248 0
CTCF G2GSE9613 3245172 3246605 1433 0
CTCF G2GSE9613 3249247 3249680 433 0
CTCF G2GSE9613 3250661 3251316 655 0
CTCF G2GSE9613 3260592 3261574 982 0
CTCF G2GSE9613 3263631 3263988 357 0
CTCF G2GSE9613 3265368 3265566 198 0
CTCF G2GSE9613 3266098 3266389 291 0
CTCF G2GSE9613 3266764 3267773 1009 0
CTCF G2GSE9613 3268317 3269023 706 0
CTCF G2GSE9613 3269463 3269830 367 0
CTCF G2GSE9613 3276010 3276358 348 0
CTCF G2GSE9613 3278371 3279470 1099 0
CTCF G2GSE9613 3285464 3285710 246 0
CTCF G2GSE9613 3286119 3287122 1003 0
CTCF G2GSE9613 3290049 3290243 194 0
CTCF G2GSE9613 3294566 3294883 317 0
CTCF G2GSE9613 3296528 3296930 402 0
CTCF G2GSE9613 3297370 3297752 382 0
CTCF G2GSE9613 3299988 3300171 183 0
CTCF G2GSE9613 3302234 3303197 963 0
CTCF G2GSE9613 3307555 3307882 327 0
CTCF G2GSE9613 3313067 3314895 1828 0
CTCF G2GSE9613 3318013 3318301 288 0
CTCF G2GSE9613 3331962 3332553 591 0
CTCF G2GSE9613 3337993 3338278 285 0
CTCF G2GSE9613 3349118 3349243 125 0
ER MCF7GSE19013 3181156 3181995 839 0
FOXA1 MCF7GSE15244 3203240 3204713 1473 0
FOXA1 MCF7GSE15244 3205338 3206194 856 0
FOXA1 MCF7GSE15244 3224279 3225330 1051 0
FOXA1 MCF7GSE15244 3292670 3293119 449 0
H3ac HepG2E 3222077 3223997 1920 0
H3ac HepG2E 3359499 3361622 2123 0
HIF1 HypoHepG2 3203460 3204568 1108 0
Myc K562GSE19551 3286281 3286699 418 0
NFkBII GM12878GSE19485 3205107 3206846 1739 0
NFkBII GM12892GSE19485 3205098 3206540 1442 0
NFkBII GM18526GSE19485 3205273 3206726 1453 0
NRSF JurkatGSE13047 3234705 3235116 411 0
NRSF-mono JurkatQuESTdata 3234704 3235142 438 0
NRSF-poly JurkatQuESTdata 3234749 3235114 365 0
Nanog hESGSE18292 3290978 3291260 282 0
Oct1 H2O2-HelaGSE14283 3174522 3174561 39 0
Oct1 H2O2-HelaGSE14283 3356557 3356584 27 0
Oct1 HelaGSE14283 3174522 3174561 39 0
Oct1 HelaGSE14283 3191241 3191292 51 0
Oct1 HelaGSE14283 3200330 3200374 44 0
Oct1 HelaGSE14283 3206313 3206352 39 0
Oct1 HelaGSE14283 3215632 3215661 29 0
Oct1 HelaGSE14283 3274569 3274599 30 0
Oct1 HelaGSE14283 3293726 3293756 30 0
Oct1 HelaGSE14283 3299960 3299998 38 0
Oct1 HelaGSE14283 3344833 3344906 73 0
P300 T30-glioblastomaGSE21026 3265084 3265758 674 0
P300 T30-glioblastomaGSE21026 3360010 3361167 1157 0
PHF8 Hs68plusFBSGSE20725 3359700 3361294 1594 0
RARA MCF7GSE15244 3222712 3224032 1320 0
TFAP2C MCF7GSE21234 3262829 3263451 622 0
TFAP2C MCF7GSE21234 3292561 3293017 456 0
TFAP2C MCF7GSE21234 3328441 3328788 347 0
USF1 HepG2E 3203424 3204774 1350 0
USF1 HepG2E 3276848 3277124 276 0
USF1 HepG2E 3278371 3279837 1466 0
USF1 HepG2E 3284814 3287122 2308 0
USF1 HepG2E 3288324 3288878 554 0
c MYCMCF7 3278371 3279615 1244 0
hScc1 BcellGSE12603 3187489 3187820 331 0
hScc1 BcellGSE12603 3190089 3190275 186 0
hScc1 BcellGSE12603 3203714 3204319 605 0
hScc1 BcellGSE12603 3205888 3206158 270 0
hScc1 BcellGSE12603 3219246 3219775 529 0
hScc1 BcellGSE12603 3222782 3223888 1106 0
hScc1 BcellGSE12603 3224859 3225248 389 0
hScc1 BcellGSE12603 3261187 3261541 354 0
hScc1 BcellGSE12603 3268524 3269023 499 0
hScc1 BcellGSE12603 3270158 3271030 872 0
hScc1 BcellGSE12603 3286119 3287122 1003 0
hScc1 BcellGSE12603 3297443 3297580 137 0
hScc1 BcellGSE12603 3306958 3307736 778 0
hScc1 BcellGSE12603 3311407 3312066 659 0
hScc1 BcellGSE12603 3344267 3345025 758 0
hScc1 BcellGSE12603 3360131 3360648 517 0
hScc1 CdLSGSE12603 3286058 3287122 1064 0
hScc1 G2GSE9613 3250661 3251245 584 0
hScc1 G2GSE9613 3266764 3267590 826 0
hScc1 G2GSE9613 3285992 3287122 1130 0
p130 shRbSenescentGSE19898 3286172 3286662 490 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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