AutismKB 2.0

Annotation Detail for TTC1


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Basic Information Top
Gene Symbol:TTC1 ( FLJ46404,TPR1 )
Gene Full Name: tetratricopeptide repeat domain 1
Band: 5q33.3
Quick LinksEntrez ID:7265; OMIM: 601963; Uniprot ID:TTC1_HUMAN; ENSEMBL ID: ENSG00000113312; HGNC ID: 12391
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
67Phosphoserine.
69Phosphoserine.
83Phosphoserine.
90Phosphoserine.
Location(AA) Modifications Resource
Location(AA) Modification Resource
69Phosphoserine(CK2)HMM predict
81N-linkedHMM predict
84N-linkedHMM predict
88N-linkedHMM predict
89Phosphoserine(CK1)HMM predict
89PhosphoserineHMM predict
96SulfotyrosineHMM predict
105Phosphoserine(CK1)HMM predict
105Phosphoserine(CK2)HMM predict
132Phosphotyrosine(EGFR)HMM predict
132Phosphotyrosine(INSR)HMM predict
212SulfotyrosineHMM predict
221Phosphoserine(CK1)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_003314
  • Location:chr5 159368757-159425126
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Nanog hESGSE18292 159368523 159368773 250 110
Oct4 hESGSE17917 159368555 159368909 354 26
P300 T0-glioblastomaGSE21026 159368068 159369156 1088 146
PHF8 293TGSE20725 159368330 159369117 787 34
TAFII hESGSE17917 159368520 159368992 472 2
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 159440498 159440677 179 15461
CTCF CD4SISSRdata 159440498 159440677 179 15461
CTCF G2GSE9613 159440387 159440784 397 15459
hScc1 BcellGSE12603 159440273 159440784 511 15402
hScc1 CdLSGSE12603 159440237 159440784 547 15384
hScc1 G2GSE9613 159440387 159440784 397 15459
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T30-glioblastomaGSE21026 159368212 159369390 1178 0
CBP T30-glioblastomaGSE21026 159380273 159381096 823 0
CTCF CD4GSE12889 159381500 159381707 207 0
CTCF CD4SISSRdata 159381500 159381707 207 0
CTCF G2GSE9613 159381353 159381678 325 0
CTCF G2GSE9613 159422458 159422640 182 0
ETS1 JurkatGSE17954 159368236 159369505 1269 0
GABP k562GSE8489 159368501 159369637 1136 0
GABP k562GSE8489 159370120 159370602 482 0
H3ac HepG2E 159368501 159369637 1136 0
H3ac HepG2E 159369980 159370779 799 0
Nanog hESGSE18292 159402283 159402787 504 0
P300 T30-glioblastomaGSE21026 159368227 159369288 1061 0
P300 T30-glioblastomaGSE21026 159380186 159381136 950 0
Pol2 GM12878GSE19551 159368488 159369449 961 0
PolII HeLaGSE12783 159368414 159369436 1022 0
STAT1 HeLaGSE12782 159403565 159404599 1034 0
STAT1 HeLaGSE12783 159403565 159404599 1034 0
STAT1 IFNSISSRdata 159403691 159404509 818 0
Sox2 hESGSE18292 159402232 159402693 461 0
TAF HelaGSE8489 159368501 159369352 851 0
hScc1 BcellGSE12603 159381392 159381847 455 0
hScc1 CdLSGSE12603 159381353 159382180 827 0
hScc1 G2GSE9613 159381353 159381774 421 0
p63 keratinocytesGSE17611 159424728 159425335 607 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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