AutismKB 2.0

Annotation Detail for TUB


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:TUB ( rd5 )
Gene Full Name: tubby homolog (mouse)
Band: 11p15.4
Quick LinksEntrez ID:7275; OMIM: 601197; Uniprot ID:TUB_HUMAN; ENSEMBL ID: ENSG00000166402; HGNC ID: 12406
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
64Phosphoserine(PKG)HMM predict
76Phosphoserine(CK1)HMM predict
102Phosphothreonine(PKA)HMM predict
102O-linkedHMM predict
195Phosphoserine(CK2)HMM predict
195Phosphoserine(IKK)HMM predict
206N-linkedHMM predict
207Phosphoserine(CK1)HMM predict
208Phosphoserine(CK1)HMM predict
209Phosphoserine(CK1)HMM predict
211Phosphoserine(IKK)HMM predict
211Phosphoserine(CK1)HMM predict
211Phosphoserine(ATM)HMM predict
223Phosphothreonine(PKC)HMM predict
233O-linkedHMM predict
233O-linkedHMM predict
236Phosphoserine(IKK)HMM predict
236O-linkedHMM predict
236Phosphoserine(CDC2)HMM predict
238O-linkedHMM predict
307Phosphoserine(IKK)HMM predict
307Phosphoserine(PKG)HMM predict
355Phosphoserine(CK1)HMM predict
356Phosphoserine(CK2)HMM predict
356O-linkedHMM predict
356Phosphoserine(IKK)HMM predict
386Phosphoserine(PKG)HMM predict
427N-linkedHMM predict
433N-linkedHMM predict
448Phosphothreonine(PKC)HMM predict
465Phosphotyrosine(INSR)HMM predict
465SulfotyrosineHMM predict
501Phosphoserine(IKK)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_003320
  • Location:chr11 8016755-8084227
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 8011261 8011681 420 5285
CTCF CD4SISSRdata 8011261 8011681 420 5285
NRSF pAbJurkat 7997753 7998258 505 18750
hScc1 BcellGSE12603 7997248 7998080 832 19092
hScc1 BcellGSE12603 8011069 8011726 657 5358
hScc1 CdLSGSE12603 8011289 8011726 437 5248
hScc1 G2GSE9613 7997125 7997916 791 19235
hScc1 G2GSE9613 8011139 8011818 679 5277
p130 QuiescentGSE19898 7997005 7997190 185 19658
p130 SenescentGSE19898 7996774 7997194 420 19772
p130 shRbQuiescentGSE19898 7996660 7997249 589 19801
p130 shRbSenescentGSE19898 7996738 7997180 442 19797
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
NRSF pAbJurkat 8017725 8018074 349 0
NRSF pAbJurkat 8058136 8058447 311 0
Nanog ESGSE20650 8050405 8050883 478 0
Nanog hESGSE18292 8050527 8050865 338 0
RARG MCF7GSE15244 8046773 8047335 562 0
hScc1 BcellGSE12603 8033320 8033708 388 0
hScc1 CdLSGSE12603 8059183 8059703 520 0
hScc1 G2GSE9613 8048658 8048955 297 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
4096 mRNA TUB chr11 8016755 8084228 419 mRNA chr11 8013325 8017790Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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