Annotation Detail for C6
Basic Information Top
| Gene Symbol: | C6 ( - ) |
|---|---|
| Gene Full Name: | complement component 6 |
| Band: | 5p13.1 |
| Quick Links | Entrez ID:729; OMIM: 217050; Uniprot ID:CO6_HUMAN; ENSEMBL ID: ENSG00000039537; HGNC ID: 1339 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 29 | C-linked (Man). | |
| 32 | C-linked (Man); partial. | |
| 90 | C-linked (Man); partial. | |
| 278 | Phosphoserine. | |
| 324 | N-linked (GlcNAc...). | |
| 568 | C-linked (Man); partial. | |
| 571 | C-linked (Man); partial. | |
| 574 | C-linked (Man); partial. | |
| 855 | N-linked (GlcNAc...). | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 29 | C-linked (Man). | Swiss-Prot 53.0 |
| 29 | C-linked | OGlycBase6.0 |
| 32 | C-linked (Man); partial. | Swiss-Prot 53.0 |
| 32 | C-linked | OGlycBase6.0 |
| 90 | C-linked | OGlycBase6.0 |
| 90 | C-linked (Man); partial. | Swiss-Prot 53.0 |
| 324 | N-linked (GlcNAc...). | Swiss-Prot 53.0 |
| 568 | C-linked (Man); partial. | Swiss-Prot 53.0 |
| 568 | C-linked | OGlycBase6.0 |
| 571 | C-linked | OGlycBase6.0 |
| 571 | C-linked (Man); partial. | Swiss-Prot 53.0 |
| 574 | C-linked | OGlycBase6.0 |
| 574 | C-linked (Man); partial. | Swiss-Prot 53.0 |
| 855 | N-linked (GlcNAc...). | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 29 | C-linked | HMM predict |
| 32 | C-linked | HMM predict |
| 41 | Phosphoserine(IKK) | HMM predict |
| 90 | C-linked | HMM predict |
| 127 | S-palmitoyl | HMM predict |
| 230 | Phosphotyrosine(Jak) | HMM predict |
| 230 | Phosphotyrosine(Syk) | HMM predict |
| 230 | Phosphotyrosine(Abl) | HMM predict |
| 255 | Phosphotyrosine(Syk) | HMM predict |
| 270 | Phosphoserine(IKK) | HMM predict |
| 280 | Phosphoserine(ATM) | HMM predict |
| 286 | Phosphoserine(CDK) | HMM predict |
| 324 | N-linked | HMM predict |
| 392 | Phosphothreonine(CK2) | HMM predict |
| 404 | Phosphothreonine(PKC) | HMM predict |
| 559 | Phosphotyrosine(INSR) | HMM predict |
| 568 | C-linked | HMM predict |
| 571 | C-linked | HMM predict |
| 574 | C-linked | HMM predict |
| 586 | Phosphothreonine(PKC) | HMM predict |
| 586 | Phosphothreonine(PKA) | HMM predict |
| 662 | Phosphotyrosine(Jak) | HMM predict |
| 780 | Phosphoserine(IKK) | HMM predict |
| 782 | Phosphoserine(IKK) | HMM predict |
| 810 | Sulfotyrosine | HMM predict |
| 855 | N-linked | HMM predict |
| 864 | Phosphotyrosine(Syk) | HMM predict |
| 876 | O-linked | HMM predict |
| 878 | O-linked | HMM predict |
| 934 | Alanine | HMM predict |
- RefSeq ID: NM_000065
- Location:chr5 41178092-41249368
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| Nanog | ES | GSE20650 | 41266257 | 41266632 | 375 | 17076 |
| Oct1 | Hela | GSE14283 | 41269179 | 41269208 | 29 | 19825 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| FoxA1 | MCF7 | MACSdata | 41229763 | 41229960 | 197 | 0 |
| Oct1 | H2O2-Hela | GSE14283 | 41233047 | 41233081 | 34 | 0 |
| Oct1 | Hela | GSE14283 | 41233049 | 41233081 | 32 | 0 |
| Oct1 | Hela | GSE14283 | 41244088 | 41244118 | 30 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 20893 | EST | chr5 | 41118764 | 41197275 | 19183 | mRNA | C6 | chr5 | 41178092 | 41249369 | Non-exonic Bidirectional (NOB) pairs | |