AutismKB 2.0

Annotation Detail for UBTF


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Basic Information Top
Gene Symbol:UBTF ( NOR-90,UBF )
Gene Full Name: upstream binding transcription factor, RNA polymerase I
Band: 17q21.31
Quick LinksEntrez ID:7343; OMIM: 600673; Uniprot ID:UBF1_HUMAN; ENSEMBL ID: ENSG00000108312; HGNC ID: 12511
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
1N-acetylmethionine.
201Phosphothreonine.
273Phosphoserine (By similarity).
336Phosphoserine (By similarity).
364Phosphoserine (By similarity).
389Phosphoserine (By similarity).
412Phosphoserine.
433Phosphoserine (By similarity).
484Phosphoserine.
546Phosphoserine (By similarity).
584Phosphoserine (By similarity).
638Phosphoserine.
Location(AA) Modifications Resource
117Phosphothreonine (MAP2K1;MAP2K)Phospho.ELM 6.0
201Phosphothreonine (MAP2K1;MAP2K)Phospho.ELM 6.0
389Phosphoserine (CDK2)Phospho.ELM 6.0
484Phosphoserine (CDK4)Phospho.ELM 6.0
Location(AA) Modification Resource
23Phosphoserine(IKK)HMM predict
117Phosphothreonine(MAPK)HMM predict
201Phosphothreonine(CDK)HMM predict
201Phosphothreonine(MAPK)HMM predict
229Phosphoserine(PKG)HMM predict
235Phosphoserine(IKK)HMM predict
256Phosphotyrosine(Syk)HMM predict
271N-linkedHMM predict
273Phosphoserine(CK2)HMM predict
273Phosphoserine(CK1)HMM predict
298Phosphothreonine(PKC)HMM predict
329Phosphoserine(ATM)HMM predict
388Phosphothreonine(PKA)HMM predict
389Phosphoserine(IKK)HMM predict
389Phosphoserine(CDC2)HMM predict
433Phosphoserine(CK1)HMM predict
456Phosphotyrosine(Jak)HMM predict
484Phosphoserine(CDC2)HMM predict
484PhosphoserineHMM predict
546Phosphoserine(CK1)HMM predict
575Phosphotyrosine(Syk)HMM predict
610Phosphoserine(ATM)HMM predict
638Phosphoserine(CDC2)HMM predict
667O-linkedHMM predict
670Phosphothreonine(PKC)HMM predict
675Phosphoserine(CK2)HMM predict
677Phosphoserine(CK1)HMM predict
677Phosphoserine(CK2)HMM predict
709PhosphoserineHMM predict
713Phosphoserine(CK1)HMM predict
714Phosphoserine(IKK)HMM predict
718Phosphoserine(CK2)HMM predict
718Phosphoserine(CK1)HMM predict
743N-linkedHMM predict
745Phosphoserine(CK1)HMM predict
748Phosphoserine(CK1)HMM predict
748Phosphoserine(IKK)HMM predict
753Phosphoserine(CK1)HMM predict
759Phosphoserine(ATM)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_001076683
  • Location:chr17 39637927-39653775
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 39653349 39654306 957 52
H3ac HepG2E 39654668 39655392 724 1255
RARG MCF7GSE15244 39662787 39663162 375 9199
TFAP2C MCF7GSE21234 39667552 39668211 659 14106
hScc1 BcellGSE12603 39655321 39655662 341 1716
hScc1 BcellGSE12603 39667753 39667932 179 14067
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
hScc1 BcellGSE12603 39652805 39654306 1501 0
hScc1 CdLSGSE12603 39652805 39654335 1530 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
11230 EST chr17 39631775 39649459 37 mRNA UBTF chr17 39639487 39651190Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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