Annotation Detail for UGP2

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Basic Information Top

Gene Symbol:	UGP2 ( UDPG,UDPGP2,UGPP2,pHC379 )
Gene Full Name:	UDP-glucose pyrophosphorylase 2
Band:	2p15
Quick Links	Entrez ID:7360; OMIM: 191760; Uniprot ID:UGPA_HUMAN; ENSEMBL ID: ENSG00000169764; HGNC ID: 12527
Relate to Another Database:	SFARIGene; denovo-db

Pathways, Diseases and Drugs

TF binding site

Post Translation Modification

PTM Sites from Uniprot:1 results
Experimental PTM Sites from dbPTM:0 results
Predicted PTM Sites by profile HMM from dbPTM:0 results

Location(AA)	Modification
438	N6-acetyllysine.

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

RefSeq ID: NM_001001521
Location:chr2 63921601-63972198
strand:+

Upstream the gene:7 results
Downstream the gene:0 results
Inside the gene:6 results

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CBP	T30-glioblastoma	GSE21026	63908200	63908874	674	13065
CTCF	G2	GSE9613	63921281	63921806	525	58
Fos	K562	GSE19551	63921161	63921883	722	80
P300	T30-glioblastoma	GSE21026	63908063	63909026	963	13057
TAF	k562	GSE8489	63920307	63921099	792	899
hScc1	Bcell	GSE12603	63921183	63921554	371	233
p130	Senescent	GSE19898	63921255	63921823	568	63

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	G2	GSE9613	63922111	63922467	356	0
PHF8	293T	GSE20725	63921042	63922558	1516	0
Pol2	GM12878	GSE19551	63920683	63922914	2231	0
Rb	Senescent	GSE19898	63921381	63922604	1223	0
p130	Senescent	GSE19898	63921840	63922424	584	0
p130	shRbQuiescent	GSE19898	63921606	63922368	762	0

Validated miRNA targets

miR Walk:5 results
Tarbase V5.0:0 results

Micro RNA Name	Stem Loop Name	The chromosome that miRNA located	Publication
hsa-miR-15a	hsa-mir-15a	13	18362358
hsa-miR-15a*	hsa-mir-15a	13	18362358
hsa-miR-16	hsa-mir-16-1	13	18362358
hsa-miR-16	hsa-mir-16-2	3	18362358
hsa-miR-16-1*	hsa-mir-16-1	13	18362358

Cis-Nats regulation

Cluster ID	Plue Type	Plus Gene Name	Plus Chromosome	Plus Start	Plus End	Overlap Length	Minus Type	Minus Gene Name	Minus Chromosome	Minus Star	Minus End	Type
14351	mRNA	UGP2	chr2	63979748	64030346	269	mRNA		chr2	63977965	63980928	Sense/Antisense (SA) pairs

Simple Query:

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

Studies: 1,036
Genes: 1,379
CNVs/SVs: 5,420
SNVs/Indels: 11,669
de novo Mutations: 5,669
Mosaics: 789
Linkage Regions: 172

Paper Collected: 6/30/2018

Last Update: 8/26/2018

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