Annotation Detail for USF2
Basic Information Top
| Gene Symbol: | USF2 ( FIP,bHLHb12 ) |
|---|---|
| Gene Full Name: | upstream transcription factor 2, c-fos interacting |
| Band: | 19q13 |
| Quick Links | Entrez ID:7392; OMIM: 600390; Uniprot ID:USF2_HUMAN; ENSEMBL ID: ENSG00000105698; HGNC ID: 12594 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 293 | Phosphothreonine. | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 293 | Phosphothreonine. | Swiss-Prot 53.0 |
| 293 | Phosphothreonine | Phospho.ELM 6.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 15 | O-linked | HMM predict |
| 100 | O-linked | HMM predict |
| 132 | O-linked | HMM predict |
| 155 | Phosphoserine(CDC2) | HMM predict |
| 178 | O-linked | HMM predict |
| 230 | Phosphothreonine(CDC2) | HMM predict |
| 230 | Phosphothreonine(MAPK) | HMM predict |
| 340 | Valine | HMM predict |
- RefSeq ID: NM_003367
- Location:chr19 40451735-40462557
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 40451020 | 40451694 | 674 | 379 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 40452293 | 40452670 | 377 | 0 |
| Oct1 | Hela | GSE14283 | 40456412 | 40456446 | 34 | 0 |
| hScc1 | Bcell | GSE12603 | 40452293 | 40452670 | 377 | 0 |
| hScc1 | Bcell | GSE12603 | 40461683 | 40462055 | 372 | 0 |
| hScc1 | CdLS | GSE12603 | 40452293 | 40452643 | 350 | 0 |
| Micro RNA Name | Stem Loop Name | The chromosome that miRNA located | Publication |
|---|---|---|---|
| hsa-miR-101 | hsa-mir-101-1 | 1 | 19074828 |
| hsa-miR-101 | hsa-mir-101-2 | 9 | 19074828 |
| hsa-miR-10a | hsa-mir-10a | 17 | 19074828 |
| hsa-miR-10a* | hsa-mir-10a | 17 | 19074828 |
| hsa-miR-150 | hsa-mir-150 | 19 | 19074828 |
| hsa-miR-150* | hsa-mir-150 | 19 | 19074828 |
| hsa-miR-151-3p | hsa-mir-151 | 8 | 19074828 |
| hsa-miR-151-5p | hsa-mir-151 | 8 | 19074828 |
| hsa-miR-155 | hsa-mir-155 | 21 | 20003307 |
| hsa-miR-155* | hsa-mir-155 | 21 | 20003307 |
| hsa-miR-17 | hsa-mir-17 | 13 | 20003307 |
| hsa-miR-17* | hsa-mir-17 | 13 | 20003307 |
| hsa-miR-21 | hsa-mir-21 | 17 | 20003307 |
| hsa-miR-21* | hsa-mir-21 | 17 | 20003307 |
| hsa-miR-424 | hsa-mir-424 | X | 20003307 |
| hsa-miR-424* | hsa-mir-424 | X | 20003307 |
| hsa-miR-92a | hsa-mir-92a-1 | 13 | 20003307 |
| hsa-miR-92a | hsa-mir-92a-2 | X | 20003307 |
| hsa-miR-96 | hsa-mir-96 | 7 | 19074828 |
| hsa-miR-96* | hsa-mir-96 | 7 | 19074828 |
| No data |
Cis-Nats regulation