Annotation Detail for VCP
Basic Information Top
| Gene Symbol: | VCP ( IBMPFD,MGC131997,MGC148092,MGC8560,TERA,p97 ) |
|---|---|
| Gene Full Name: | valosin-containing protein |
| Band: | 9p13.3 |
| Quick Links | Entrez ID:7415; OMIM: 601023; Uniprot ID:TERA_HUMAN; ENSEMBL ID: ENSG00000165280; HGNC ID: 12666 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 2 | N-acetylalanine. | |
| 3 | Phosphoserine. | |
| 7 | Phosphoserine (By similarity). | |
| 37 | Phosphoserine. | |
| 282 | Phosphoserine. | |
| 284 | Phosphoserine. | |
| 436 | Phosphothreonine. | |
| 457 | Phosphoserine. | |
| 509 | Phosphothreonine. | |
| 702 | Phosphoserine. | |
| 705 | Phosphoserine. | |
| 746 | Phosphoserine. | |
| 748 | Phosphoserine. | |
| 770 | Phosphoserine. | |
| 775 | Phosphoserine. | |
| 784 | Phosphoserine. | |
| 787 | Phosphoserine. | |
| 805 | Phosphotyrosine. | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 2 | N-acetylalanine. | Swiss-Prot 53.0 |
| 7 | Phosphoserine (By similarity). | Swiss-Prot 53.0 |
| 351 | Phosphoserine | Phospho.ELM 6.0 |
| 745 | Phosphoserine | Phospho.ELM 6.0 |
| 747 | Phosphoserine | Phospho.ELM 6.0 |
| 783 | Phosphoserine | Phospho.ELM 6.0 |
| 804 | Phosphotyrosine | Phospho.ELM 6.0 |
| 805 | Phosphotyrosine. | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 7 | Phosphoserine(CK2) | HMM predict |
| 42 | Phosphoserine(ATM) | HMM predict |
| 134 | Phosphotyrosine(Syk) | HMM predict |
| 197 | Phosphoserine(CK1) | HMM predict |
| 260 | N-linked | HMM predict |
| 316 | Phosphothreonine | HMM predict |
| 401 | N-linked | HMM predict |
| 664 | Phosphoserine(CDC2) | HMM predict |
| 716 | N-linked | HMM predict |
| 748 | Phosphoserine(PKB) | HMM predict |
| 770 | Phosphoserine(CDK) | HMM predict |
| 784 | Phosphoserine(ATM) | HMM predict |
| 784 | O-linked | HMM predict |
| 787 | Phosphoserine(IKK) | HMM predict |
| 787 | O-linked | HMM predict |
- RefSeq ID: NM_007126
- Location:chr9 35046560-35062563
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| p130 | Senescent | GSE19898 | 35062290 | 35063163 | 873 | 163 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 35041342 | 35041770 | 428 | 5005 |
| CTCF | CD4 | SISSRdata | 35041342 | 35041770 | 428 | 5005 |
| Oct1 | Hela | GSE14283 | 35044333 | 35044363 | 30 | 2213 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| Fos | K562 | GSE19551 | 35061777 | 35063108 | 1331 | 0 |
| H3ac | HepG2 | E | 35059200 | 35059408 | 208 | 0 |
| H3ac | HepG2 | E | 35059801 | 35060409 | 608 | 0 |
| PHF8 | HeLa | GSE20725 | 35061578 | 35063057 | 1479 | 0 |
| hScc1 | Bcell | GSE12603 | 35048795 | 35048976 | 181 | 0 |
| hScc1 | Bcell | GSE12603 | 35061678 | 35062670 | 992 | 0 |
| p130 | shRbSenescent | GSE19898 | 35062141 | 35062676 | 535 | 0 |
Validated miRNA targets