Annotation Detail for VRK1
Basic Information Top
| Gene Symbol: | VRK1 ( MGC117401,MGC138280,MGC142070,PCH1 ) |
|---|---|
| Gene Full Name: | vaccinia related kinase 1 |
| Band: | 14q32.2 |
| Quick Links | Entrez ID:7443; OMIM: 602168; Uniprot ID:VRK1_HUMAN; ENSEMBL ID: ENSG00000100749; HGNC ID: 12718 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 355 | Phosphothreonine; by autocatalysis. | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 305 | Phosphothreonine | Phospho.ELM 6.0 |
| 355 | Phosphothreonine (by autocatalysis). | Swiss-Prot 53.0 |
| 355 | Phosphothreonine | Phospho.ELM 6.0 |
| 390 | Phosphothreonine | Phospho.ELM 6.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 57 | N-linked | HMM predict |
| 58 | Phosphoserine(CK1) | HMM predict |
| 194 | Phosphotyrosine(Syk) | HMM predict |
| 317 | Phosphotyrosine(INSR) | HMM predict |
| 386 | Phosphothreonine(PKC) | HMM predict |
| 390 | Phosphothreonine(PKC) | HMM predict |
- RefSeq ID: NM_003384
- Location:chr14 96333436-96417702
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| Fos | K562 | GSE19551 | 96333057 | 96333752 | 695 | 32 |
| LIN9 | G0 | GSE7516 | 96333009 | 96333662 | 653 | 101 |
| Oct1 | H2O2-Hela | GSE14283 | 96318451 | 96318492 | 41 | 14965 |
| Oct1 | Hela | GSE14283 | 96318451 | 96318492 | 41 | 14965 |
| P300 | T0-glioblastoma | GSE21026 | 96333099 | 96333497 | 398 | 139 |
| P300 | T30-glioblastoma | GSE21026 | 96332974 | 96333761 | 787 | 69 |
| Rb | Senescent | GSE19898 | 96333232 | 96333597 | 365 | 22 |
| p130 | Quiescent | GSE19898 | 96333119 | 96333617 | 498 | 69 |
| p130 | Senescent | GSE19898 | 96333060 | 96333601 | 541 | 106 |
| p130 | shRbSenescent | GSE19898 | 96333141 | 96333613 | 472 | 60 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| Oct1 | H2O2-Hela | GSE14283 | 96428364 | 96428393 | 29 | 10676 |
| Oct1 | Hela | GSE14283 | 96428360 | 96428399 | 39 | 10677 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 96389054 | 96389247 | 193 | 0 |
| CTCF | CD4 | SISSRdata | 96389054 | 96389247 | 193 | 0 |
| ER | Fulvestrant-MCF7 | GSE14664 | 96394524 | 96394588 | 64 | 0 |
| ER | Fulvestrant-MCF7 | GSE14664 | 96394648 | 96394714 | 66 | 0 |
| ETS1 | Jurkat | GSE17954 | 96332972 | 96334480 | 1508 | 0 |
| H3K4me3 | colorectal | cancer | 96333951 | 96334560 | 609 | 0 |
| H3ac | HepG2 | E | 96333983 | 96334910 | 927 | 0 |
| Oct1 | Hela | GSE14283 | 96347195 | 96347224 | 29 | 0 |
| PHF8 | 293T | GSE20725 | 96333219 | 96334122 | 903 | 0 |
| PHF8 | HeLa | GSE20725 | 96333128 | 96334258 | 1130 | 0 |
| Rb | shRbQuiescent | GSE19898 | 96333349 | 96333576 | 227 | 0 |
| Rb | shRbSenescence | GSE19898 | 96333377 | 96333603 | 226 | 0 |
| TAF | k562 | GSE8489 | 96334197 | 96334801 | 604 | 0 |
| USF1 | HepG2 | E | 96335195 | 96336247 | 1052 | 0 |
| hScc1 | Bcell | GSE12603 | 96388990 | 96389313 | 323 | 0 |
| hScc1 | CdLS | GSE12603 | 96388920 | 96389418 | 498 | 0 |
| p130 | shRbQuiescent | GSE19898 | 96333283 | 96333667 | 384 | 0 |
| p130 | shRbSenescent | GSE19898 | 96333695 | 96334204 | 509 | 0 |
| p63 | keratinocytes | GSE17611 | 96357337 | 96358084 | 747 | 0 |
Validated miRNA targets