AutismKB 2.0

Annotation Detail for WNT1


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Basic Information Top
Gene Symbol:WNT1 ( INT1 )
Gene Full Name: wingless-type MMTV integration site family, member 1
Band: 12q13.12
Quick LinksEntrez ID:7471; OMIM: 164820; Uniprot ID:WNT1_HUMAN; ENSEMBL ID: ENSG00000125084; HGNC ID: 12774
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
29N-linked (GlcNAc...) (Potential).
316N-linked (GlcNAc...) (Potential).
346N-linked (GlcNAc...) (Potential).
359N-linked (GlcNAc...) (Potential).
Location(AA) Modifications Resource
29N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
316N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
346N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
359N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
Location(AA) Modification Resource
29N-linkedHMM predict
138Phosphoserine(IKK)HMM predict
147O-linkedHMM predict
208Phosphothreonine(PKC)HMM predict
238Phosphothreonine(PKC)HMM predict
316N-linkedHMM predict
329S-palmitoylHMM predict
330S-palmitoylHMM predict
342Phosphothreonine(PKA)HMM predict
346N-linkedHMM predict
352CysteineHMM predict
353CysteineHMM predict
355ValineHMM predict
359N-linkedHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_005430
  • Location:chr12 47658502-47662745
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF JurkatGSE12889 47658081 47658252 171 336
CTCF G2GSE9613 47657018 47659963 2945 12
FOXA1 MCF7GSE15244 47657231 47657678 447 1048
H3K27me3 colorectalcancer 47655355 47656455 1100 2598
H3K27me3 colorectalcancer 47657231 47657980 749 897
NRSF pAbJurkat 47657520 47658283 763 601
RARA MCF7GSE15244 47657018 47657844 826 1072
RARG MCF7GSE15244 47657048 47657879 831 1039
TFAP2C MCF7GSE21234 47657253 47658018 765 867
hScc1 BcellGSE12603 47657520 47658938 1418 274
hScc1 CdLSGSE12603 47657879 47658795 916 166
hScc1 G2GSE9613 47657520 47659331 1811 77
p130 shRbSenescentGSE19898 47658063 47658236 173 353
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 47668175 47668505 330 5595
CTCF CD4SISSRdata 47668175 47668505 330 5595
CTCF JurkatGSE12889 47668112 47668468 356 5545
CTCF G2GSE9613 47665262 47665608 346 2690
CTCF G2GSE9613 47666620 47668707 2087 4918
FOXA1 MCF7GSE15244 47667755 47668264 509 5264
NRSF pAbJurkat 47666454 47666939 485 3951
RARG MCF7GSE15244 47667791 47668224 433 5262
hScc1 BcellGSE12603 47666730 47667538 808 4389
hScc1 BcellGSE12603 47667977 47668459 482 5473
hScc1 G2GSE9613 47668049 47668459 410 5509
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 47660812 47662117 1305 0
hScc1 BcellGSE12603 47659331 47659704 373 0
hScc1 BcellGSE12603 47661194 47661917 723 0
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-let-7b hsa-let-7b 22 19351815
hsa-let-7b* hsa-let-7b 22 19351815
hsa-let-7e hsa-let-7e 19 19398721
hsa-let-7e* hsa-let-7e 19 19398721
hsa-miR-21 hsa-mir-21 17 19398721
hsa-miR-21* hsa-mir-21 17 19398721
hsa-miR-34a hsa-mir-34a 1 19398721
hsa-miR-34a hsa-mir-34a 1 19336450
hsa-miR-34a* hsa-mir-34a 1 19398721
hsa-miR-34a* hsa-mir-34a 1 19336450
hsa-miR-449a hsa-mir-449a 5 19351815
hsa-miR-449b hsa-mir-449b 5 19351815
hsa-miR-605 hsa-mir-605 10 19336450
No data
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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