AutismKB 2.0

Annotation Detail for WNT6


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Basic Information Top
Gene Symbol:WNT6 ( - )
Gene Full Name: wingless-type MMTV integration site family, member 6
Band: 2q35
Quick LinksEntrez ID:7475; OMIM: 604663; Uniprot ID:WNT6_HUMAN; ENSEMBL ID: ENSG00000115596; HGNC ID: 12785
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
86N-linked (GlcNAc...) (Potential).
311N-linked (GlcNAc...) (Potential).
Location(AA) Modifications Resource
86N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
311N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
Location(AA) Modification Resource
86N-linkedHMM predict
134S-palmitoylHMM predict
146O-linkedHMM predict
151Phosphothreonine(CDC2)HMM predict
151O-linkedHMM predict
160O-linkedHMM predict
160Phosphoserine(CDC2)HMM predict
275Phosphothreonine(PKC)HMM predict
302Phosphoserine(CDK)HMM predict
302Phosphoserine(CDC2)HMM predict
302Phosphoserine(CAMK2)HMM predict
311N-linkedHMM predict
324S-palmitoylHMM predict
325S-palmitoylHMM predict
340S-palmitoylHMM predict
347CysteineHMM predict
348S-palmitoylHMM predict
348CysteineHMM predict
350ValineHMM predict
356ArginineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_006522
  • Location:chr2 219432789-219447197
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 219420719 219420971 252 11945
CTCF CD4GSE12889 219425911 219426095 184 6787
CTCF CD4SISSRdata 219420719 219420971 252 11945
CTCF CD4SISSRdata 219425911 219426095 184 6787
CTCF HelaGSE12889 219420555 219420939 384 12043
CTCF JurkatGSE12889 219420685 219420964 279 11965
CTCF JurkatGSE12889 219425892 219426122 230 6783
CTCF G2GSE9613 219420332 219420843 511 12202
CTCF G2GSE9613 219425916 219426576 660 6544
CTCF G2GSE9613 219428401 219428599 198 4290
CTCF G2GSE9613 219432157 219432378 221 522
H3K27me3 colorectalcancer 219426057 219428365 2308 5579
H3K27me3 colorectalcancer 219429085 219430173 1088 3161
H3K27me3 colorectalcancer 219430759 219432087 1328 1367
Myc K562GSE19551 219420580 219421053 473 11973
Oct4 hESGSE17917 219420677 219420935 258 11984
Rb QuiescentGSE19898 219420890 219420981 91 11854
Rb SenescentGSE19898 219420704 219420997 293 11939
STAT1 IFNSISSRdata 219420566 219420941 375 12036
TAFII hESGSE17917 219420673 219420999 326 11954
USF2 HepG2E 219420332 219420843 511 12202
hScc1 BcellGSE12603 219420412 219420843 431 12162
hScc1 BcellGSE12603 219425916 219426401 485 6631
hScc1 CdLSGSE12603 219420332 219420843 511 12202
hScc1 CdLSGSE12603 219425916 219426325 409 6669
hScc1 G2GSE9613 219420453 219420843 390 12142
hScc1 G2GSE9613 219425916 219426612 696 6526
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T0-glioblastomaGSE21026 219447833 219448177 344 808
CTCF CD4GSE12889 219449609 219450015 406 2615
CTCF CD4SISSRdata 219449609 219450015 406 2615
CTCF JurkatGSE12889 219449669 219449912 243 2593
CTCF G2GSE9613 219449268 219449957 689 2415
H3K27me3 colorectalcancer 219447318 219447662 344 293
hScc1 BcellGSE12603 219449383 219449957 574 2473
hScc1 CdLSGSE12603 219449383 219450432 1049 2710
hScc1 G2GSE9613 219449268 219449928 660 2401
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 219432891 219433832 941 0
CTCF G2GSE9613 219438876 219439403 527 0
CTCF G2GSE9613 219442014 219442459 445 0
CTCF G2GSE9613 219444634 219445412 778 0
CTCF G2GSE9613 219446125 219446990 865 0
H3K27me3 colorectalcancer 219433495 219435054 1559 0
hScc1 BcellGSE12603 219432891 219433137 246 0
hScc1 BcellGSE12603 219438986 219439292 306 0
hScc1 BcellGSE12603 219446240 219446923 683 0
hScc1 G2GSE9613 219432891 219433097 206 0
hScc1 G2GSE9613 219446392 219446990 598 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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