Annotation Detail for XG

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Basic Information Top

Gene Symbol:	XG ( MGC118758,MGC118759,MGC118760,MGC118761,PBDX )
Gene Full Name:	Xg blood group
Band:	Xp22.33
Quick Links	Entrez ID:7499; OMIM: 314700; Uniprot ID:XG_HUMAN; ENSEMBL ID: ENSG00000124343; HGNC ID: 12806
Relate to Another Database:	SFARIGene; denovo-db

Pathways, Diseases and Drugs

TF binding site

Post Translation Modification

PTM Sites from Uniprot:0 results
Experimental PTM Sites from dbPTM:0 results
Predicted PTM Sites by profile HMM from dbPTM:7 results

No data

Location(AA)	Modification	Resource
53	Phosphotyrosine(EGFR)	HMM predict
53	Sulfotyrosine	HMM predict
100	Methylarginine	HMM predict
102	Methylarginine	HMM predict
114	Phosphotyrosine(INSR)	HMM predict
114	Phosphotyrosine(Jak)	HMM predict
132	Phosphotyrosine(INSR)	HMM predict

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

RefSeq ID: NM_175569
Location:chrX 2680114-2743959
strand:+

Upstream the gene:0 results
Downstream the gene:3 results
Inside the gene:9 results

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	CD4	GSE12889	2747685	2747848	163	3807
CTCF	CD4	SISSRdata	2747685	2747848	163	3807
CTCF	Hela	GSE12889	2747687	2747987	300	3878

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	CD4	GSE12889	2740611	2740817	206	0
CTCF	CD4	SISSRdata	2740611	2740817	206	0
CTCF	Hela	GSE12889	2740547	2740728	181	0
CTCF	Jurkat	GSE12889	2740621	2740765	144	0
CTCF	G2	GSE9613	2740437	2740859	422	0
Oct4	hES	GSE21916	2728015	2728650	635	0
hScc1	Bcell	GSE12603	2740365	2741045	680	0
hScc1	CdLS	GSE12603	2740075	2741078	1003	0
hScc1	G2	GSE9613	2740437	2741115	678	0

Validated miRNA targets

Cis-Nats regulation

Cluster ID	Plue Type	Plus Gene Name	Plus Chromosome	Plus Start	Plus End	Overlap Length	Minus Type	Minus Gene Name	Minus Chromosome	Minus Star	Minus End	Type
27316	mRNA	XG	chrX	2663475	2727327	311	EST		chrX	2726831	2735473	Sense/Antisense (SA) pairs

Simple Query:

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

Studies: 1,036
Genes: 1,379
CNVs/SVs: 5,420
SNVs/Indels: 11,669
de novo Mutations: 5,669
Mosaics: 789
Linkage Regions: 172

Paper Collected: 6/30/2018

Last Update: 8/26/2018

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