Annotation Detail for ZIC1
Basic Information Top
| Gene Symbol: | ZIC1 ( ZIC,ZNF201 ) |
|---|---|
| Gene Full Name: | Zic family member 1 (odd-paired homolog, Drosophila) |
| Band: | 3q24 |
| Quick Links | Entrez ID:7545; OMIM: 600470; Uniprot ID:ZIC1_HUMAN; ENSEMBL ID: ENSG00000152977; HGNC ID: 12872 |
| Relate to Another Database: | SFARIGene; denovo-db |
| No data |
| No data |
| Location(AA) | Modification | Resource |
|---|---|---|
| 50 | N-linked | HMM predict |
| 95 | N-linked | HMM predict |
| 172 | Phosphotyrosine(EGFR) | HMM predict |
| 178 | Phosphotyrosine(SRC) | HMM predict |
| 183 | Phosphoserine(CDC2) | HMM predict |
| 183 | Phosphoserine(MAPK) | HMM predict |
| 189 | Phosphotyrosine(Syk) | HMM predict |
| 197 | Phosphotyrosine(INSR) | HMM predict |
| 243 | N-linked | HMM predict |
| 345 | N-linked | HMM predict |
| 362 | Phosphotyrosine(Jak) | HMM predict |
| 372 | Phosphothreonine(CDK) | HMM predict |
| 387 | Phosphoserine(CK1) | HMM predict |
| 388 | Phosphoserine(CK1) | HMM predict |
| 388 | Phosphoserine(ATM) | HMM predict |
| 391 | Phosphoserine(ATM) | HMM predict |
| 391 | Phosphoserine(IKK) | HMM predict |
| 391 | O-linked | HMM predict |
| 394 | Phosphoserine(IKK) | HMM predict |
| 394 | O-linked | HMM predict |
| 401 | Phosphotyrosine(EGFR) | HMM predict |
| 403 | O-linked | HMM predict |
| 404 | O-linked | HMM predict |
| 405 | O-linked | HMM predict |
| 408 | O-linked | HMM predict |
| 411 | O-linked | HMM predict |
| 413 | O-linked | HMM predict |
| 416 | N-linked | HMM predict |
| 418 | O-linked | HMM predict |
| 419 | O-linked | HMM predict |
| 420 | O-linked | HMM predict |
| 423 | Phosphoserine(ATM) | HMM predict |
| 423 | Phosphoserine(CDC2) | HMM predict |
| 423 | O-linked | HMM predict |
| 426 | O-linked | HMM predict |
- RefSeq ID: NM_003412
- Location:chr3 148609870-148617193
- strand:+
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 148619771 | 148620068 | 297 | 2726 |
| Oct1 | H2O2-Hela | GSE14283 | 148629044 | 148629075 | 31 | 11866 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 148610559 | 148611342 | 783 | 0 |
| CTCF | G2 | GSE9613 | 148613097 | 148613774 | 677 | 0 |
| FOXA1 | MCF7 | GSE15244 | 148615935 | 148616673 | 738 | 0 |
| FoxA1 | MCF7 | MACSdata | 148616179 | 148616446 | 267 | 0 |
| H3K27me3 | colorectal | cancer | 148611196 | 148612955 | 1759 | 0 |
| H3K27me3 | colorectal | cancer | 148613846 | 148614546 | 700 | 0 |
| PHF8 | Hs68plusFBS | GSE20725 | 148610609 | 148611909 | 1300 | 0 |
| Micro RNA Name | Stem Loop Name | The chromosome that miRNA located | Publication |
|---|---|---|---|
| hsa-miR-101 | hsa-mir-101-1 | 1 | 20676061 |
| hsa-miR-101 | hsa-mir-101-2 | 9 | 20676061 |
| hsa-miR-130b | hsa-mir-130b | 22 | 20676061 |
| hsa-miR-130b* | hsa-mir-130b | 22 | 20676061 |
| hsa-miR-140-3p | hsa-mir-140 | 16 | 20676061 |
| hsa-miR-29c | hsa-mir-29c | 1 | 20676061 |
| hsa-miR-29c* | hsa-mir-29c | 1 | 20676061 |
| hsa-miR-30b | hsa-mir-30b | 8 | 20676061 |
| hsa-miR-30b* | hsa-mir-30b | 8 | 20676061 |
| No data |
| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 18815 | mRNA | ZIC1 | chr3 | 148609878 | 148615046 | 1167 | mRNA | ZIC1 | chr3 | 148610112 | 148611573 | Sense/Antisense (SA) pairs |