AutismKB 2.0

Annotation Detail for C21orf2


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Basic Information Top
Gene Symbol:C21orf2 ( A2,YF5 )
Gene Full Name: chromosome 21 open reading frame 2
Band: 21q22.3
Quick LinksEntrez ID:755; OMIM: 603191; Uniprot ID:CU002_HUMAN; ENSEMBL ID: ENSG00000160226; HGNC ID: 1260
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
102Phosphothreonine.
136Phosphoserine.
177Phosphoserine.
201Phosphoserine.
238Phosphothreonine.
Location(AA) Modifications Resource
Location(AA) Modification Resource
107Phosphotyrosine(Abl)HMM predict
127Phosphothreonine(CK2)HMM predict
136Phosphoserine(PKG)HMM predict
136Phosphoserine(CAMK2)HMM predict
136Phosphoserine(CK2)HMM predict
136Phosphoserine(CK1)HMM predict
165Phosphoserine(CK2)HMM predict
166O-linkedHMM predict
170Phosphothreonine(PKC)HMM predict
177PhosphoserineHMM predict
177Phosphoserine(CK1)HMM predict
209Phosphoserine(CK1)HMM predict
238Phosphothreonine(PKC)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_004928
  • Location:chr21 44573254-44583573
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ETS1 JurkatGSE17954 44583344 44584228 884 213
FoxA1 MCF7MACSdata 44586530 44586750 220 3067
H3ac HepG2E 44583960 44584135 175 474
P300 T30-glioblastomaGSE21026 44583310 44584380 1070 272
PHF8 HeLaGSE20725 44583310 44584423 1113 293
PHF8 Hs68minusFBSGSE20725 44583304 44584452 1148 305
PHF8 Hs68plusFBSGSE20725 44582915 44584490 1575 129
Rb GrowingGSE19898 44583603 44583851 248 154
Rb SenescentGSE19898 44583601 44583923 322 189
Rb shRbSenescenceGSE19898 44583726 44583971 245 275
p130 QuiescentGSE19898 44583651 44583976 325 240
p130 SenescentGSE19898 44583591 44584217 626 331
p130 shRbSenescentGSE19898 44583389 44584207 818 225
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 44574564 44575066 502 0
CTCF G2GSE9613 44579892 44580484 592 0
hScc1 BcellGSE12603 44576946 44577644 698 0
hScc1 BcellGSE12603 44578115 44578842 727 0
p130 QuiescentGSE19898 44583394 44583514 120 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
17036 mRNA chr21 44575544 44580162 280 mRNA C21orf2 chr21 44573254 44583574Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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