AutismKB 2.0

Annotation Detail for PCGF2


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Basic Information Top
Gene Symbol:PCGF2 ( MEL-18,MGC10545,RNF110,ZNF144 )
Gene Full Name: polycomb group ring finger 2
Band: 17q12
Quick LinksEntrez ID:7703; OMIM: 600346; Uniprot ID:PCGF2_HUMAN; ENSEMBL ID: ENSG00000056661; HGNC ID: 12929
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
95Nuclear localization signal (Potential).
344Phosphothreonine.
Location(AA) Modifications Resource
Location(AA) Modification Resource
98Phosphotyrosine(Syk)HMM predict
108N-linkedHMM predict
111N-linkedHMM predict
126Phosphoserine(CK2)HMM predict
126Phosphoserine(CK2)HMM predict
173Phosphothreonine(PKC)HMM predict
237Phosphothreonine(PKA)HMM predict
243Phosphothreonine(CDK)HMM predict
245O-linkedHMM predict
249N-linkedHMM predict
258Phosphoserine(CK1)HMM predict
265Phosphoserine(CDC2)HMM predict
268O-linkedHMM predict
272O-linkedHMM predict
272O-linkedHMM predict
273O-linkedHMM predict
273O-linkedHMM predict
275Phosphoserine(IKK)HMM predict
275O-linkedHMM predict
275O-linkedHMM predict
278Phosphoserine(IKK)HMM predict
278Phosphoserine(CDC2)HMM predict
278O-linkedHMM predict
281Phosphothreonine(MAPK)HMM predict
281Phosphothreonine(CDK)HMM predict
286O-linkedHMM predict
289O-linkedHMM predict
298O-linkedHMM predict
299Phosphoserine(MAPK)HMM predict
299Phosphoserine(CDC2)HMM predict
299O-linkedHMM predict
301Phosphothreonine(CDK)HMM predict
301Phosphothreonine(MAPK)HMM predict
301O-linkedHMM predict
304O-linkedHMM predict
304O-linkedHMM predict
304O-linkedHMM predict
305O-linkedHMM predict
307O-linkedHMM predict
307Phosphoserine(IKK)HMM predict
307O-linkedHMM predict
310O-linkedHMM predict
311O-linkedHMM predict
323Phosphothreonine(CDK)HMM predict
323Phosphothreonine(MAPK)HMM predict
325Phosphoserine(MAPK)HMM predict
326Phosphoserine(MAPK)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_007144
  • Location:chr17 34143675-34158083
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
H3K4me3 colorectalcancer 34159764 34160557 793 2077
RARG MCF7GSE15244 34159825 34160347 522 2003
USF1 HepG2E 34158185 34158713 528 366
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 34143016 34143878 862 229
H3ac HepG2E 34140268 34142081 1813 2501
TFAP2C MCF7GSE21234 34140467 34141072 605 2906
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 34144956 34145142 186 0
CTCF CD4SISSRdata 34144956 34145142 186 0
CTCF HelaGSE12889 34144960 34145273 313 0
CTCF JurkatGSE12889 34144951 34145117 166 0
CTCF G2GSE9613 34144565 34145748 1183 0
CTCF G2GSE9613 34155466 34155728 262 0
CTCF G2GSE9613 34157265 34157705 440 0
H3ac HepG2E 34155466 34157077 1611 0
USF1 HepG2E 34155466 34157146 1680 0
USF2 HepG2E 34155466 34156918 1452 0
hScc1 BcellGSE12603 34144565 34145401 836 0
hScc1 BcellGSE12603 34157193 34157612 419 0
hScc1 CdLSGSE12603 34144530 34145495 965 0
p130 QuiescentGSE19898 34151075 34151310 235 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
11033 mRNA LOC284106 chr17 34140137 34144823 1148 mRNA PCGF2 chr17 34143675 34158084Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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