Annotation Detail for CA12
Basic Information Top
| Gene Symbol: | CA12 ( CAXII,FLJ20151,HsT18816 ) |
|---|---|
| Gene Full Name: | carbonic anhydrase XII |
| Band: | 15q22.2 |
| Quick Links | Entrez ID:771; OMIM: 603263; Uniprot ID:CAH12_HUMAN; ENSEMBL ID: ENSG00000074410; HGNC ID: 1371 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 28 | N-linked (GlcNAc...) (Potential). | |
| 80 | N-linked (GlcNAc...) (Potential). | |
| 162 | N-linked (GlcNAc...) (Potential). | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 28 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 80 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 162 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 23 | Phosphoserine(CDC2) | HMM predict |
| 23 | Phosphoserine(IKK) | HMM predict |
| 23 | Phosphoserine(MAPK) | HMM predict |
| 23 | O-linked | HMM predict |
| 28 | N-linked | HMM predict |
| 72 | Phosphothreonine(MAPK) | HMM predict |
| 180 | N-linked | HMM predict |
| 195 | Phosphotyrosine(Jak) | HMM predict |
| 227 | O-linked | HMM predict |
| 231 | N-linked | HMM predict |
| 266 | Phosphoserine(IKK) | HMM predict |
| 331 | Phosphoserine(PKG) | HMM predict |
- RefSeq ID: NM_001218
- Location:chr15 61402783-61461127
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| ER | MCF7 | GSE19013 | 61474722 | 61475670 | 948 | 14069 |
| Nanog | ES | GSE20650 | 61475684 | 61476231 | 547 | 14830 |
| Nanog | hES | GSE18292 | 61475712 | 61476287 | 575 | 14872 |
| Oct1 | H2O2-Hela | GSE14283 | 61472941 | 61472988 | 47 | 11837 |
| Oct1 | H2O2-Hela | GSE14283 | 61480600 | 61480636 | 36 | 19491 |
| Oct1 | Hela | GSE14283 | 61472941 | 61472988 | 47 | 11837 |
| Oct1 | Hela | GSE14283 | 61480600 | 61480636 | 36 | 19491 |
| RARA | MCF7 | GSE15244 | 61466609 | 61467940 | 1331 | 6147 |
| Sox2 | hES | GSE18292 | 61475700 | 61476131 | 431 | 14788 |
| TFAP2C | MCF7 | GSE21234 | 61466681 | 61467443 | 762 | 5935 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 61406279 | 61406451 | 172 | 0 |
| CTCF | G2 | GSE9613 | 61409083 | 61409361 | 278 | 0 |
| CTCF | G2 | GSE9613 | 61424592 | 61424959 | 367 | 0 |
| ER | MCF7 | GSE19013 | 61459337 | 61460193 | 856 | 0 |
| Fos | K562 | GSE19551 | 61424048 | 61424750 | 702 | 0 |
| Myc | K562 | GSE19551 | 61424053 | 61424469 | 416 | 0 |
| Oct1 | Hela | GSE14283 | 61408720 | 61408754 | 34 | 0 |
| RARA | MCF7 | GSE15244 | 61457651 | 61459909 | 2258 | 0 |
| TFAP2C | MCF7 | GSE21234 | 61414184 | 61414791 | 607 | 0 |
| TFAP2C | MCF7 | GSE21234 | 61458673 | 61459087 | 414 | 0 |
| hScc1 | Bcell | GSE12603 | 61447803 | 61448159 | 356 | 0 |
| p130 | Senescent | GSE19898 | 61412066 | 61412490 | 424 | 0 |
| p130 | Senescent | GSE19898 | 61451492 | 61452330 | 838 | 0 |
| Micro RNA Name | Stem Loop Name | The chromosome that miRNA located | Publication |
|---|---|---|---|
| hsa-let-7b | hsa-let-7b | 22 | 18668040 |
| hsa-let-7b* | hsa-let-7b | 22 | 18668040 |
| hsa-miR-1 | hsa-mir-1-2 | 18 | 18668040 |
| hsa-miR-1 | hsa-mir-1-1 | 20 | 18668040 |
| hsa-miR-155 | hsa-mir-155 | 21 | 18668040 |
| hsa-miR-155* | hsa-mir-155 | 21 | 18668040 |
| hsa-miR-16 | hsa-mir-16-1 | 13 | 18668040 |
| hsa-miR-16 | hsa-mir-16-2 | 3 | 18668040 |
| hsa-miR-30a | hsa-mir-30a | 6 | 18668040 |
| hsa-miR-30a* | hsa-mir-30a | 6 | 18668040 |
| hsa-miR-30b | hsa-mir-30b | 8 | 18668040 |
| hsa-miR-30b* | hsa-mir-30b | 8 | 18668040 |
| hsa-miR-30c | hsa-mir-30c-2 | 6 | 18668040 |
| hsa-miR-30c | hsa-mir-30c-1 | 1 | 18668040 |
| hsa-miR-30c-1* | hsa-mir-30c-1 | 1 | 18668040 |
| hsa-miR-30c-2* | hsa-mir-30c-2 | 6 | 18668040 |
| hsa-miR-30d | hsa-mir-30d | 8 | 18668040 |
| hsa-miR-30d* | hsa-mir-30d | 8 | 18668040 |
| hsa-miR-30e | hsa-mir-30e | 1 | 18668040 |
| hsa-miR-30e* | hsa-mir-30e | 1 | 18668040 |
| ID in Tarbase | Data Type | Support Type | miRNA | Gene | Direct Support | Publication |
|---|---|---|---|---|---|---|
| 1031 | Unknown | pSILAC | miR-16 | CA12 | down 50-25% | 18668040 |
| Ensembl | Protein Type | Differentially expressed in | Pathology or Event | Mis Regulation | Gene Expression | Tumour Involvement |
| ENSG00000074410 | n_a | n_a | n_a | "epithelium, leukocyte, muscle cell" | "benign tumour, malignant tumour, carcinoma, sarcoma" |
Cis-Nats regulation