AutismKB 2.0

Annotation Detail for LAPTM5


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Basic Information Top
Gene Symbol:LAPTM5 ( CLAST6,FLJ61683,FLJ97251,MGC125860,MGC125861 )
Gene Full Name: lysosomal protein transmembrane 5
Band: 1p35.2
Quick LinksEntrez ID:7805; OMIM: 601476; Uniprot ID:LAPM5_HUMAN; ENSEMBL ID: ENSG00000162511; HGNC ID: 29612
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
259Phosphotyrosine (By similarity).
Location(AA) Modifications Resource
Location(AA) Modification Resource
7Phosphothreonine(PKC)HMM predict
13S-palmitoylHMM predict
14S-palmitoylHMM predict
130Phosphoserine(PKG)HMM predict
175Phosphoserine(ATM)HMM predict
244Phosphoserine(CK1)HMM predict
249Phosphothreonine(CDC2)HMM predict
254ProlineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_006762
  • Location:chr1 30977902-31003253
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 31007325 31008292 967 4555
CTCF G2GSE9613 31009593 31009906 313 6496
CTCF G2GSE9613 31014002 31014842 840 11169
CTCF G2GSE9613 31015745 31015965 220 12602
Gata1 K562GSE18868 31014131 31015028 897 11326
Gata2 K562GSE18868 31013999 31015244 1245 11368
NFkBII GM12878GSE19485 31009983 31012328 2345 7902
NFkBII GM15510GSE19485 31010182 31011982 1800 7829
NFkBII GM18526GSE19485 30999868 31009307 9439 1334
NFkBII GM18526GSE19485 31010017 31012043 2026 7777
hScc1 BcellGSE12603 31005556 31005733 177 2391
hScc1 BcellGSE12603 31007674 31008333 659 4750
hScc1 BcellGSE12603 31009475 31009906 431 6437
hScc1 BcellGSE12603 31014447 31014806 359 11373
hScc1 BcellGSE12603 31015745 31015965 220 12602
hScc1 BcellGSE12603 31020683 31021325 642 17751
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 30974842 30975712 870 2626
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 30983115 30983328 213 0
CTCF G2GSE9613 30993201 30993662 461 0
CTCF G2GSE9613 30994939 30995370 431 0
Fos K562GSE19551 30986472 30987129 657 0
NFkBII GM12878GSE19485 30998360 31005857 7497 0
NFkBII GM15510GSE19485 30998597 31003932 5335 0
Nanog hESGSE18292 30978310 30978620 310 0
TFAP2C MCF7GSE21234 31002015 31002575 560 0
hScc1 BcellGSE12603 30993445 30993766 321 0
hScc1 BcellGSE12603 31000000 31000230 230 0
hScc1 BcellGSE12603 31000861 31001109 248 0
hScc1 BcellGSE12603 31002681 31003118 437 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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