Annotation Detail for TUBA1A
Basic Information Top
| Gene Symbol: | TUBA1A ( B-ALPHA-1,FLJ25113,LIS3,TUBA3 ) |
|---|---|
| Gene Full Name: | tubulin, alpha 1a |
| Band: | 12q13.12 |
| Quick Links | Entrez ID:7846; OMIM: 602529; Uniprot ID:TBA1A_HUMAN; ENSEMBL ID: ENSG00000167552; HGNC ID: 20766 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 6 | Phosphoserine (By similarity). | |
| 40 | N6-acetyllysine (By similarity). | |
| 48 | Phosphoserine. | |
| 272 | Phosphotyrosine (By similarity). | |
| 439 | Phosphoserine. | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 439 | Phosphoserine. | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 38 | Phosphoserine(ATM) | HMM predict |
| 82 | Phosphothreonine(PKC) | HMM predict |
| 94 | Phosphothreonine(CK2) | HMM predict |
| 165 | Phosphoserine(PKG) | HMM predict |
| 178 | O-linked | HMM predict |
| 179 | O-linked | HMM predict |
| 179 | O-linked | HMM predict |
| 224 | Phosphotyrosine(INSR) | HMM predict |
| 277 | O-linked | HMM predict |
| 380 | N-linked | HMM predict |
| 432 | Phosphotyrosine(Syk) | HMM predict |
- RefSeq ID: NM_006009
- Location:chr12 47864851-47869127
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| TAFII | hES | GSE17917 | 47868897 | 47869405 | 508 | 24 |
| p130 | Quiescent | GSE19898 | 47869316 | 47869755 | 439 | 408 |
| p130 | Senescent | GSE19898 | 47868990 | 47869758 | 768 | 247 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 47853045 | 47853221 | 176 | 11719 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 47865221 | 47865652 | 431 | 0 |
| CTCF | G2 | GSE9613 | 47866587 | 47866723 | 136 | 0 |
| CTCF | G2 | GSE9613 | 47868214 | 47869168 | 954 | 0 |
| ER | MCF7 | GSE19013 | 47867830 | 47868768 | 938 | 0 |
| FOXA1 | MCF7 | GSE15244 | 47868483 | 47869168 | 685 | 0 |
| Pol2 | GM12878 | GSE19551 | 47868372 | 47869505 | 1133 | 0 |
| RARA | MCF7 | GSE15244 | 47866448 | 47866828 | 380 | 0 |
| RARG | MCF7 | GSE15244 | 47866448 | 47866828 | 380 | 0 |
| Rb | Quiescent | GSE19898 | 47868373 | 47868899 | 526 | 0 |
| hScc1 | Bcell | GSE12603 | 47868323 | 47868822 | 499 | 0 |
| hScc1 | CdLS | GSE12603 | 47868566 | 47869329 | 763 | 0 |
| p130 | Quiescent | GSE19898 | 47868980 | 47869222 | 242 | 0 |
| p130 | Senescent | GSE19898 | 47867828 | 47868698 | 870 | 0 |
| p130 | shRbSenescent | GSE19898 | 47868743 | 47869304 | 561 | 0 |
| No data |
| ID in Tarbase | Data Type | Support Type | miRNA | Gene | Direct Support | Publication |
|---|---|---|---|---|---|---|
| 602 | mRNA repression | TRUE | miR-30a-3p | tuba3 | n_a | 16239240 |
| Ensembl | Protein Type | Differentially expressed in | Pathology or Event | Mis Regulation | Gene Expression | Tumour Involvement |
| ENSG00000167552 | n_a | n_a | n_a | "epithelium, squamous cell, lymphocyte, leukocyte" | "benign tumour, malignant tumour, carcinoma, leukaemia, sarcoma" |
Cis-Nats regulation