AutismKB 2.0

Annotation Detail for COLEC11


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Basic Information Top
Gene Symbol:COLEC11 ( CL-K1-I,CL-K1-II,CL-K1-IIa,CL-K1-IIb,CLK1,DKFZp686N1868,MGC3279 )
Gene Full Name: collectin sub-family member 11
Band: 2p25.3
Quick LinksEntrez ID:78989; OMIM: 612502; Uniprot ID:COL11_HUMAN; ENSEMBL ID: ENSG00000118004; HGNC ID: 17213
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_024027
  • Location:chr2 3620511-3669919
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Oct1 HelaGSE14283 3614024 3614064 40 6468
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 3676460 3676782 322 6702
CTCF CD4SISSRdata 3676460 3676782 322 6702
CTCF G2GSE9613 3672910 3673395 485 3233
CTCF G2GSE9613 3674039 3674527 488 4364
CTCF G2GSE9613 3675844 3677628 1784 6817
TFAP2C MCF7GSE21234 3676263 3676840 577 6632
hScc1 BcellGSE12603 3675844 3677166 1322 6586
hScc1 CdLSGSE12603 3676198 3677306 1108 6833
hScc1 G2GSE9613 3676233 3677342 1109 6868
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF HelaGSE12889 3654400 3654590 190 0
CTCF G2GSE9613 3620509 3620817 308 0
CTCF G2GSE9613 3622535 3622892 357 0
CTCF G2GSE9613 3632162 3632293 131 0
CTCF G2GSE9613 3638892 3639075 183 0
CTCF G2GSE9613 3652229 3652600 371 0
CTCF G2GSE9613 3652945 3653491 546 0
CTCF G2GSE9613 3654401 3654944 543 0
CTCF G2GSE9613 3658425 3658746 321 0
CTCF G2GSE9613 3665841 3666369 528 0
CTCF G2GSE9613 3667228 3667554 326 0
CTCF G2GSE9613 3668220 3668625 405 0
CTCF G2GSE9613 3669063 3669612 549 0
H3ac HepG2E 3622418 3623150 732 0
H3ac HepG2E 3627083 3628650 1567 0
H3ac HepG2E 3631051 3632588 1537 0
H3ac HepG2E 3633229 3634492 1263 0
HIF1 HypoHepG2 3631051 3631331 280 0
HIF1 NormHepG2 3631051 3631366 315 0
Myc K562GSE19551 3630448 3631289 841 0
Oct1 H2O2-HelaGSE14283 3661323 3661354 31 0
Oct1 H2O2-HelaGSE14283 3667185 3667222 37 0
Oct1 HelaGSE14283 3661286 3661361 75 0
PHF8 293TGSE20725 3630410 3631223 813 0
USF1 HepG2E 3622465 3623257 792 0
USF1 HepG2E 3623832 3625172 1340 0
USF1 HepG2E 3627083 3628650 1567 0
USF1 HepG2E 3629092 3630008 916 0
USF1 HepG2E 3631051 3632867 1816 0
USF1 HepG2E 3633229 3634778 1549 0
USF2 HepG2E 3627083 3628650 1567 0
USF2 HepG2E 3629092 3630008 916 0
USF2 HepG2E 3631051 3632658 1607 0
USF2 HepG2E 3633229 3634249 1020 0
hScc1 BcellGSE12603 3629664 3630008 344 0
hScc1 BcellGSE12603 3666081 3666443 362 0
hScc1 BcellGSE12603 3668292 3668555 263 0
hScc1 CdLSGSE12603 3654371 3654801 430 0
p63 keratinocytesGSE17611 3645919 3646930 1011 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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