Annotation Detail for DDX50
Basic Information Top
| Gene Symbol: | DDX50 ( GU2,GUB,MGC3199,RH-II/GuB ) |
|---|---|
| Gene Full Name: | DEAD (Asp-Glu-Ala-Asp) box polypeptide 50 |
| Band: | 10q22.1 |
| Quick Links | Entrez ID:79009; OMIM: 610373; Uniprot ID:DDX50_HUMAN; ENSEMBL ID: ENSG00000107625; HGNC ID: 17906 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 45 | Phosphoserine. | |
| 82 | Phosphoserine. | |
| 165 | Q motif. | |
| 293 | DEVD box. | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 45 | Phosphoserine. | Swiss-Prot 53.0 |
| 45 | Phosphoserine | Phospho.ELM 6.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 22 | Phosphoserine(ATM) | HMM predict |
| 35 | Phosphoserine(PKG) | HMM predict |
| 39 | Sulfotyrosine | HMM predict |
| 45 | Phosphoserine(CK1) | HMM predict |
| 64 | Phosphoserine(PKG) | HMM predict |
| 86 | Phosphoserine(CK1) | HMM predict |
| 104 | Phosphotyrosine(Syk) | HMM predict |
| 113 | Phosphoserine(CK1) | HMM predict |
| 239 | Phosphoserine(PKG) | HMM predict |
| 314 | Phosphothreonine(CK2) | HMM predict |
| 355 | Phosphothreonine(PKC) | HMM predict |
| 361 | Phosphothreonine(PKC) | HMM predict |
| 401 | N-linked | HMM predict |
| 425 | Phosphoserine(ATM) | HMM predict |
| 613 | Phosphoserine(PKG) | HMM predict |
| 641 | Phosphoserine(PKC) | HMM predict |
| 667 | Sulfotyrosine | HMM predict |
| 671 | N-linked | HMM predict |
| 675 | N-linked | HMM predict |
| 705 | Phosphoserine(PKG) | HMM predict |
| 709 | Phosphoserine(IKK) | HMM predict |
| 725 | N-linked | HMM predict |
- RefSeq ID: NM_024045
- Location:chr10 70331039-70376607
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 70327318 | 70327518 | 200 | 3622 |
| CTCF | CD4 | SISSRdata | 70327318 | 70327518 | 200 | 3622 |
| Fos | K562 | GSE19551 | 70330337 | 70331652 | 1315 | 45 |
| GABP | Hela | GSE8489 | 70329063 | 70330168 | 1105 | 1424 |
| GABP | k562 | GSE8489 | 70328742 | 70330424 | 1682 | 1457 |
| H3ac | HepG2 | E | 70330061 | 70330529 | 468 | 745 |
| HIF1 | Hypo | HepG2 | 70330567 | 70331327 | 760 | 93 |
| PHF8 | 293T | GSE20725 | 70330008 | 70331699 | 1691 | 186 |
| PHF8 | HeLa | GSE20725 | 70330231 | 70331720 | 1489 | 64 |
| PHF8 | Hs68minusFBS | GSE20725 | 70330149 | 70331723 | 1574 | 104 |
| PHF8 | Hs68plusFBS | GSE20725 | 70329963 | 70331865 | 1902 | 126 |
| TAF | k562 | GSE8489 | 70328742 | 70330492 | 1750 | 1423 |
| hScc1 | Bcell | GSE12603 | 70327189 | 70327584 | 395 | 3653 |
| hScc1 | CdLS | GSE12603 | 70327001 | 70327584 | 583 | 3747 |
| hScc1 | G2 | GSE9613 | 70327153 | 70327584 | 431 | 3671 |
| p130 | Quiescent | GSE19898 | 70330281 | 70330889 | 608 | 455 |
| p130 | Senescent | GSE19898 | 70330332 | 70331521 | 1189 | 113 |
| p130 | shRbSenescent | GSE19898 | 70330415 | 70331516 | 1101 | 74 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| H3ac | HepG2 | E | 70331327 | 70331926 | 599 | 0 |
| H3ac | HepG2 | E | 70332459 | 70332859 | 400 | 0 |
| Rb | shRbSenescence | GSE19898 | 70331338 | 70331545 | 207 | 0 |
| TAF | k562 | GSE8489 | 70331371 | 70331926 | 555 | 0 |
| TFAP2C | MCF7 | GSE21234 | 70330941 | 70331341 | 400 | 0 |
| p130 | Quiescent | GSE19898 | 70330939 | 70331387 | 448 | 0 |
Validated miRNA targets