AutismKB 2.0

Annotation Detail for ELOVL6


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Basic Information Top
Gene Symbol:ELOVL6 ( FACE,FAE,FLJ23378,LCE,MGC5487 )
Gene Full Name: ELOVL family member 6, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)
Band: 4q25
Quick LinksEntrez ID:79071; OMIM: 611546; Uniprot ID:ELOV6_HUMAN; ENSEMBL ID: ENSG00000170522; HGNC ID: 15829
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
2N-linked (GlcNAc...) (Potential).
Location(AA) Modifications Resource
Location(AA) Modification Resource
84Phosphotyrosine(SRC)HMM predict
97Phosphoserine(IKK)HMM predict
249PhenylalanineHMM predict
250PhenylalanineHMM predict
251PhenylalanineHMM predict
258MethionineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_024090
  • Location:chr4 111189991-111339219
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 111351874 111352245 371 12840
CTCF CD4SISSRdata 111351874 111352245 371 12840
CTCF G2GSE9613 111352287 111352417 130 13133
Nanog hESGSE18292 111351883 111352261 378 12853
Rb GrowingGSE19898 111339684 111339812 128 529
Sox2 hESGSE18292 111351937 111352336 399 12917
TFAP2C MCF7GSE21234 111339115 111339658 543 167
hScc1 BcellGSE12603 111351795 111352417 622 12887
p130 QuiescentGSE19898 111339259 111339523 264 172
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Oct1 H2O2-HelaGSE14283 111180541 111180586 45 9428
Oct1 HelaGSE14283 111180541 111180582 41 9430
Oct1 HelaGSE14283 111186065 111186101 36 3909
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 111190641 111190837 196 0
CTCF CD4SISSRdata 111190641 111190837 196 0
CTCF G2GSE9613 111190449 111191033 584 0
CTCF G2GSE9613 111192110 111192290 180 0
CTCF G2GSE9613 111285673 111285994 321 0
CTCF G2GSE9613 111305620 111305913 293 0
CTCF G2GSE9613 111336628 111337546 918 0
CTCF G2GSE9613 111338218 111338831 613 0
ER E2-MCF7GSE14664 111330170 111330215 45 0
ER Fulvestrant-MCF7GSE14664 111330171 111330215 44 0
FOXA1 eGFPGSE10845 111313488 111314025 537 0
Fos K562GSE19551 111334297 111334885 588 0
FoxA1 MCF7MACSdata 111313533 111313916 383 0
FoxA1 MCF7MACSdata 111313957 111314166 209 0
H3K4me3 colorectalcancer 111336779 111336956 177 0
H3K4me3 colorectalcancer 111338622 111338944 322 0
H3ac HepG2E 111336152 111337223 1071 0
H3ac HepG2E 111338471 111339148 677 0
Myc K562GSE19551 111305937 111306398 461 0
Oct1 H2O2-HelaGSE14283 111209293 111209320 27 0
Oct1 HelaGSE14283 111254492 111254541 49 0
Oct1 HelaGSE14283 111255818 111255856 38 0
Oct1 HelaGSE14283 111292410 111292447 37 0
Oct1 HelaGSE14283 111330168 111330215 47 0
Rb QuiescentGSE19898 111336633 111337154 521 0
Rb shRbSenescenceGSE19898 111336635 111336815 180 0
TAF k562GSE8489 111334626 111336738 2112 0
USF2 HepG2E 111205409 111205591 182 0
hScc1 BcellGSE12603 111190552 111191206 654 0
hScc1 BcellGSE12603 111336886 111337590 704 0
hScc1 BcellGSE12603 111338514 111339111 597 0
hScc1 CdLSGSE12603 111190509 111191206 697 0
hScc1 G2GSE9613 111190626 111191033 407 0
hScc1 G2GSE9613 111336664 111337920 1256 0
p130 QuiescentGSE19898 111337100 111337301 201 0
p130 shRbSenescentGSE19898 111337748 111338075 327 0
p63 keratinocytesGSE17611 111268782 111269715 933 0
p63 keratinocytesGSE17611 111336001 111337066 1065 0
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-miR-142-5p hsa-mir-142 17 20178649
hsa-miR-146a hsa-mir-146a 5 20178649
hsa-miR-146a* hsa-mir-146a 5 20178649
No data
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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