AutismKB 2.0

Annotation Detail for C11orf49


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Basic Information Top
Gene Symbol:C11orf49 ( FLJ22210,MGC4707 )
Gene Full Name: chromosome 11 open reading frame 49
Band: 11p11.2
Quick LinksEntrez ID:79096; OMIM: NA; Uniprot ID:CK049_HUMAN; ENSEMBL ID: ENSG00000149179; HGNC ID: 28720
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
12SulfotyrosineHMM predict
39Phosphoserine(ATM)HMM predict
97Phosphothreonine(PKC)HMM predict
177Phosphoserine(IKK)HMM predict
215Phosphotyrosine(INSR)HMM predict
288Phosphoserine(CDC2)HMM predict
288Phosphoserine(CDK)HMM predict
288Phosphoserine(IKK)HMM predict
298Phosphothreonine(MAPK)HMM predict
298Phosphothreonine(CDC2)HMM predict
304Phosphoserine(CDC2)HMM predict
322PhosphoserineHMM predict
322Phosphoserine(IKK)HMM predict
322Phosphoserine(CK2)HMM predict
322Phosphoserine(CK1)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_001003676
  • Location:chr11 46914826-47140371
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T30-glioblastomaGSE21026 46907941 46908901 960 6406
ETS1 JurkatGSE17954 46914268 46915280 1012 53
Fos K562GSE19551 46908079 46908729 650 6423
GABP HelaGSE8489 46913661 46914016 355 988
GABP HelaGSE8489 46914356 46914839 483 229
GABP k562GSE8489 46913293 46914016 723 1172
GABP k562GSE8489 46914356 46915286 930 6
Oct1 H2O2-HelaGSE14283 46910513 46910560 47 4290
Oct1 HelaGSE14283 46910508 46910562 54 4292
P300 T0-glioblastomaGSE21026 46914227 46914961 734 233
P300 T30-glioblastomaGSE21026 46907824 46908997 1173 6416
TAF HelaGSE8489 46913661 46914016 355 988
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 47131293 47131548 255 0
CTCF CD4SISSRdata 47131293 47131548 255 0
CTCF HelaGSE12889 47131258 47131637 379 0
ER MCF7GSE19013 47074318 47074875 557 0
ER MCF7GSE19013 47108608 47109225 617 0
FOXA1 DLD1GSE12801 46962994 46963803 809 0
FOXA1 DLD1GSE12801 47117139 47117361 222 0
FOXA1 MCF7GSE15244 46914591 46915286 695 0
FOXA1 MCF7GSE15244 46925740 46926386 646 0
FOXA1 MCF7GSE15244 47077505 47078098 593 0
FOXA1 MCF7GSE15244 47121533 47121826 293 0
Fos K562GSE19551 47034244 47035004 760 0
FoxA1 MCF7MACSdata 47044347 47044627 280 0
H3ac HepG2E 46915002 46915286 284 0
NFkBII GM12892GSE19485 46995856 46996881 1025 0
Oct1 HelaGSE14283 46930745 46930784 39 0
Oct1 HelaGSE14283 47136851 47136888 37 0
RARG MCF7GSE15244 47131018 47132033 1015 0
Rb SenescentGSE19898 47131166 47131690 524 0
Rb shRbSenescenceGSE19898 47131150 47131317 167 0
TAFII hESGSE17917 46914714 46915062 348 0
TFAP2C MCF7GSE21234 47121395 47121987 592 0
hScc1 BcellGSE12603 47131018 47131583 565 0
hScc1 BcellGSE12603 47139248 47139973 725 0
hScc1 CdLSGSE12603 47130982 47131583 601 0
hScc1 CdLSGSE12603 47139116 47139451 335 0
hScc1 G2GSE9613 47130393 47131583 1190 0
hScc1 G2GSE9613 47138464 47140044 1580 0
p130 QuiescentGSE19898 47131395 47131591 196 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
4390 mRNA MGC4707 chr11 46914826 47142505 78 mRNA ZNF289 chr11 47142427 47154995Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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