Annotation Detail for DERL1

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Basic Information Top

Gene Symbol:	DERL1 ( DER-1,DER1,FLJ13784,FLJ42092,MGC3067,PRO2577 )
Gene Full Name:	Der1-like domain family, member 1
Band:	8q24.13
Quick Links	Entrez ID:79139; OMIM: 608813; Uniprot ID:DERL1_HUMAN; ENSEMBL ID: ENSG00000136986; HGNC ID: 28454
Relate to Another Database:	SFARIGene; denovo-db

Post Translation Modification

Location(AA)	Modification
202	Phosphothreonine.

Location(AA)	Modification	Resource
35	Phosphoserine(MAPK)	HMM predict

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
FOXA1	MCF7	GSE15244	124134638	124134821	183	11008
Nanog	ES	GSE20650	124133860	124134072	212	10245
Rb	Quiescent	GSE19898	124123629	124123871	242	29
p130	shRbQuiescent	GSE19898	124123231	124124257	1026	23

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
FOXA1	MCF7	GSE15244	124076212	124076549	337	18388
FOXA1	MCF7	GSE15244	124090349	124090823	474	4183
RARA	MCF7	GSE15244	124076179	124076847	668	18256
RARG	MCF7	GSE15244	124076212	124076549	337	18388
RARG	MCF7	GSE15244	124077283	124077646	363	17304

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length
CTCF	CD4	GSE12889	124103896	124104263	367
CTCF	CD4	GSE12889	124119783	124119992	209
CTCF	CD4	SISSRdata	124103896	124104263	367
CTCF	CD4	SISSRdata	124119783	124119992	209
ETS1	Jurkat	GSE17954	124122771	124124155	1384
FOXA1	MCF7	GSE15244	124119710	124120627	917
FOXA1	MCF7	GSE15244	124123107	124123946	839
H3K4me2	HCT116	GSE10453	124121670	124123180	1510
H3K4me3	colorectal	cancer	124121670	124123837	2167
H3ac	HepG2	E	124121740	124122172	432
H3ac	HepG2	E	124122493	124123213	720
LIN9	S	GSE7516	124123144	124123800	656
Oct1	H2O2-Hela	GSE14283	124098958	124098989	31
Oct1	Hela	GSE14283	124098958	124098989	31
PHF8	HeLa	GSE20725	124123010	124124285	1275
RARA	MCF7	GSE15244	124099853	124100932	1079
RARA	MCF7	GSE15244	124119020	124120243	1223
USF1	HepG2	E	124122457	124123265	808
hScc1	Bcell	GSE12603	124103759	124104244	485
hScc1	Bcell	GSE12603	124123265	124123837	572
hScc1	CdLS	GSE12603	124103617	124104283	666
p130	Quiescent	GSE19898	124123044	124123195	151
p130	Senescent	GSE19898	124123004	124124043	1039
p130	shRbSenescent	GSE19898	124122980	124123964	984

Validated miRNA targets

Micro RNA Name	Stem Loop Name	The chromosome that miRNA located	Publication
hsa-let-7a	hsa-let-7a-1	9	19342589
hsa-let-7a	hsa-let-7a-2	11	19342589
hsa-let-7a	hsa-let-7a-3	22	19342589
hsa-let-7a*	hsa-let-7a-1	9	19342589
hsa-let-7a*	hsa-let-7a-3	22	19342589
hsa-let-7b	hsa-let-7b	22	19342589
hsa-let-7b*	hsa-let-7b	22	19342589
hsa-let-7c	hsa-let-7c	21	19342589
hsa-let-7c*	hsa-let-7c	21	19342589
hsa-let-7d	hsa-let-7d	9	19342589
hsa-let-7d*	hsa-let-7d	9	19342589
hsa-let-7e	hsa-let-7e	19	19342589
hsa-let-7e*	hsa-let-7e	19	19342589
hsa-let-7f	hsa-let-7f-1	9	19342589
hsa-let-7f	hsa-let-7f-2	X	19342589
hsa-let-7f-1*	hsa-let-7f-1	9	19342589
hsa-let-7f-2*	hsa-let-7f-2	X	19342589
hsa-let-7g	hsa-let-7g	3	19342589
hsa-let-7g*	hsa-let-7g	3	19342589
hsa-let-7i	hsa-let-7i	12	19342589
hsa-let-7i*	hsa-let-7i	12	19342589
hsa-miR-21	hsa-mir-21	17	19342589
hsa-miR-21*	hsa-mir-21	17	19342589

Cis-Nats regulation

Cluster ID	Plue Type	Plus Gene Name	Plus Chromosome	Plus Start	Plus End	Overlap Length	Minus Type	Minus Gene Name	Minus Chromosome	Minus Star	Minus End	Type
25908	EST		chr8	124083980	124112172	112	mRNA	DERL1	chr8	124094768	124123722	Sense/Antisense (SA) pairs

Simple Query:

Paper Collected: 6/30/2018

Last Update: 8/26/2018