Annotation Detail for GDPD3
Basic Information Top
| Gene Symbol: | GDPD3 ( FLJ22603,MGC4171 ) |
|---|---|
| Gene Full Name: | glycerophosphodiester phosphodiesterase domain containing 3 |
| Band: | 16p11.2 |
| Quick Links | Entrez ID:79153; OMIM: NA; Uniprot ID:GDPD3_HUMAN; ENSEMBL ID: ENSG00000102886; HGNC ID: 28638 |
| Relate to Another Database: | SFARIGene; denovo-db |
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| Location(AA) | Modification | Resource |
|---|---|---|
| 58 | Phosphoserine(ATM) | HMM predict |
| 173 | N-linked | HMM predict |
| 221 | Phosphoserine(CK2) | HMM predict |
- RefSeq ID: NM_024307
- Location:chr16 30023631-30032358
- strand:-
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| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 30031526 | 30031833 | 307 | 0 |
| CTCF | CD4 | SISSRdata | 30031526 | 30031833 | 307 | 0 |
| CTCF | G2 | GSE9613 | 30031030 | 30032331 | 1301 | 0 |
| TFAP2C | MCF7 | GSE21234 | 30031492 | 30032842 | 1350 | 0 |
| hScc1 | CdLS | GSE12603 | 30031498 | 30032043 | 545 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 9819 | mRNA | LOC283901 | chr16 | 30015251 | 30024278 | 199 | mRNA | GDPD3 | chr16 | 30023632 | 30032359 | Sense/Antisense (SA) pairs |