AutismKB 2.0

Annotation Detail for C19orf57


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Basic Information Top
Gene Symbol:C19orf57 ( MGC11271,MGC149720 )
Gene Full Name: chromosome 19 open reading frame 57
Band: 19p13.12
Quick LinksEntrez ID:79173; OMIM: NA; Uniprot ID:CS057_HUMAN; ENSEMBL ID: ENSG00000132016; HGNC ID: 28153
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
204Phosphoserine.
208Phosphoserine.
213Phosphoserine.
370Phosphoserine.
Location(AA) Modifications Resource
No data
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_024323
  • Location:chr19 13854167-13877908
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 13877719 13878147 428 25
P300 T30-glioblastomaGSE21026 13877549 13878364 815 48
PHF8 HeLaGSE20725 13877266 13878638 1372 44
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 13834021 13834381 360 19967
CTCF CD4SISSRdata 13834021 13834381 360 19967
CTCF HelaGSE12889 13844380 13844756 376 9600
CTCF JurkatGSE12889 13834095 13834330 235 19955
CTCF G2GSE9613 13836846 13837790 944 16850
CTCF G2GSE9613 13843037 13843358 321 10970
CTCF G2GSE9613 13844331 13844670 339 9667
CTCF G2GSE9613 13851864 13852493 629 1989
Fos K562GSE19551 13851773 13852546 773 2008
Myc K562GSE19551 13851888 13852463 575 1992
P300 T30-glioblastomaGSE21026 13851614 13852557 943 2082
Rb SenescentGSE19898 13851999 13852311 312 2013
TFAP2C MCF7GSE21234 13845935 13846374 439 8013
TFAP2C MCF7GSE21234 13853014 13853554 540 884
VDR GM10861-stimGSE22484 13851458 13852793 1335 2042
hScc1 BcellGSE12603 13836636 13837819 1183 16940
hScc1 BcellGSE12603 13851864 13852677 813 1897
hScc1 CdLSGSE12603 13851864 13852493 629 1989
hScc1 G2GSE9613 13851864 13852567 703 1952
p130 QuiescentGSE19898 13852080 13852303 223 1976
p130 SenescentGSE19898 13852421 13852615 194 1650
p130 SenescentGSE19898 13852931 13853092 161 1156
p130 shRbQuiescentGSE19898 13852005 13852475 470 1928
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 13874967 13875233 266 0
CTCF CD4SISSRdata 13874967 13875233 266 0
ER MCF7GSE19013 13859991 13860452 461 0
Gata2 K562GSE18868 13869052 13869721 669 0
TFAP2C MCF7GSE21234 13856256 13857688 1432 0
TFAP2C MCF7GSE21234 13860076 13860630 554 0
TFAP2C MCF7GSE21234 13864586 13865013 427 0
hScc1 BcellGSE12603 13856457 13856808 351 0
hScc1 BcellGSE12603 13858836 13859271 435 0
hScc1 BcellGSE12603 13860036 13860467 431 0
hScc1 BcellGSE12603 13861993 13862303 310 0
hScc1 BcellGSE12603 13877564 13878076 512 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
12782 mRNA FLJ20241 chr19 13864992 13902691 96 mRNA MGC11271 chr19 13854167 13877909Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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