Annotation Detail for C3orf52
Basic Information Top
| Gene Symbol: | C3orf52 ( FLJ23186,TTMP ) |
|---|---|
| Gene Full Name: | chromosome 3 open reading frame 52 |
| Band: | 3q13.2 |
| Quick Links | Entrez ID:79669; OMIM: 611956; Uniprot ID:TTMP_HUMAN; ENSEMBL ID: ENSG00000114529; HGNC ID: 26255 |
| Relate to Another Database: | SFARIGene; denovo-db |
| No data |
| No data |
| Location(AA) | Modification | Resource |
|---|---|---|
| 7 | Phosphoserine(ATM) | HMM predict |
| 26 | Phosphothreonine(MAPK) | HMM predict |
| 54 | Phosphoserine(IKK) | HMM predict |
| 106 | N-linked | HMM predict |
| 140 | Phosphoserine(MAPK) | HMM predict |
| 148 | Phosphothreonine(PKC) | HMM predict |
| 159 | N-linked | HMM predict |
| 203 | S-farnesyl | HMM predict |
| 212 | Phosphoserine(MAPK) | HMM predict |
- RefSeq ID: NM_024616
- Location:chr3 113287928-113319732
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| FOXA1 | MCF7 | GSE15244 | 113287387 | 113287575 | 188 | 448 |
| RARG | MCF7 | GSE15244 | 113286429 | 113287044 | 615 | 1192 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CBP | T30-glioblastoma | GSE21026 | 113298659 | 113299573 | 914 | 0 |
| CTCF | CD4 | GSE12889 | 113313423 | 113313663 | 240 | 0 |
| CTCF | CD4 | SISSRdata | 113313423 | 113313663 | 240 | 0 |
| CTCF | G2 | GSE9613 | 113287646 | 113288259 | 613 | 0 |
| CTCF | G2 | GSE9613 | 113293687 | 113294141 | 454 | 0 |
| CTCF | G2 | GSE9613 | 113313154 | 113313789 | 635 | 0 |
| ER | MCF7 | GSE19013 | 113312717 | 113313405 | 688 | 0 |
| FOXA1 | MCF7 | GSE15244 | 113292369 | 113293020 | 651 | 0 |
| FOXA1 | MCF7 | GSE15244 | 113310753 | 113311529 | 776 | 0 |
| Fos | K562 | GSE19551 | 113298907 | 113299400 | 493 | 0 |
| FoxA1 | MCF7 | MACSdata | 113310931 | 113311122 | 191 | 0 |
| P300 | T30-glioblastoma | GSE21026 | 113298647 | 113299724 | 1077 | 0 |
| RARA | MCF7 | GSE15244 | 113292573 | 113293020 | 447 | 0 |
| RARG | MCF7 | GSE15244 | 113292573 | 113293020 | 447 | 0 |
| VDR | GM10861-stim | GSE22484 | 113291438 | 113293414 | 1976 | 0 |
| hScc1 | Bcell | GSE12603 | 113287711 | 113288724 | 1013 | 0 |
| hScc1 | Bcell | GSE12603 | 113313002 | 113314009 | 1007 | 0 |
| hScc1 | CdLS | GSE12603 | 113313271 | 113314009 | 738 | 0 |
| hScc1 | G2 | GSE9613 | 113313117 | 113314081 | 964 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 18485 | mRNA | TTMP | chr3 | 113287928 | 113319733 | 334 | EST | chr3 | 113318099 | 113318512 | Sense/Antisense (SA) pairs | |