AutismKB 2.0

Annotation Detail for TBL1XR1


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Basic Information Top
Gene Symbol:TBL1XR1 ( C21,DC42,FLJ12894,IRA1,TBLR1 )
Gene Full Name: transducin (beta)-like 1 X-linked receptor 1
Band: 3q26.32
Quick LinksEntrez ID:79718; OMIM: 608628; Uniprot ID:TBL1R_HUMAN; ENSEMBL ID: ENSG00000177565; HGNC ID: 29529
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
119Phosphoserine.
254N6-acetyllysine.
Location(AA) Modifications Resource
Location(AA) Modification Resource
35Phosphoserine(ATM)HMM predict
59Phosphotyrosine(INSR)HMM predict
94O-linkedHMM predict
119Phosphoserine(ATM)HMM predict
144N-linkedHMM predict
188Phosphoserine(IKK)HMM predict
197N-linkedHMM predict
201N-linkedHMM predict
202Phosphoserine(CK1)HMM predict
204Phosphoserine(CK2)HMM predict
204Phosphoserine(CK1)HMM predict
204Phosphoserine(IKK)HMM predict
230Phosphoserine(CK1)HMM predict
319N-linkedHMM predict
320N-linkedHMM predict
321O-linkedHMM predict
330S-palmitoylHMM predict
400Phosphoserine(CDC2)HMM predict
419Phosphoserine(IKK)HMM predict
446Phosphotyrosine(SRC)HMM predict
451Phosphoserine(CDC2)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_024665
  • Location:chr3 178221867-178397733
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 178397086 178398824 1738 222
CTCF G2GSE9613 178415763 178415953 190 18125
FOXA1 MCF7GSE15244 178412265 178412958 693 14878
RARA MCF7GSE15244 178399053 178399767 714 1677
RARA MCF7GSE15244 178409691 178409982 291 12103
RARA MCF7GSE15244 178412265 178412958 693 14878
RARG MCF7GSE15244 178409691 178409982 291 12103
RARG MCF7GSE15244 178412265 178412958 693 14878
TAF k562GSE8489 178398577 178399285 708 1198
hScc1 BcellGSE12603 178397375 178398614 1239 261
hScc1 CdLSGSE12603 178396480 178399177 2697 95
hScc1 CdLSGSE12603 178402049 178402540 491 4561
hScc1 G2GSE9613 178396519 178398975 2456 14
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 178251323 178251514 191 0
CTCF CD4SISSRdata 178251323 178251514 191 0
H3K4me3 colorectalcancer 178395620 178396868 1248 0
H3ac HepG2E 178395687 178396868 1181 0
NFkBII GM15510GSE19485 178345277 178346306 1029 0
NRSF JurkatSISSRdata 178388116 178388279 163 0
RARA MCF7GSE15244 178350646 178351222 576 0
RARA MCF7GSE15244 178396383 178396701 318 0
TAF HelaGSE8489 178395758 178396910 1152 0
TAF k562GSE8489 178394099 178397124 3025 0
TFAP2C MCF7GSE21234 178285040 178285452 412 0
TFAP2C MCF7GSE21234 178289520 178290040 520 0
hScc1 BcellGSE12603 178396665 178397124 459 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
19024 mRNA chr3 178221243 178225203 3329 mRNA TBL1XR1 chr3 178221874 178397742Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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