AutismKB 2.0

Annotation Detail for C17orf42


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Basic Information Top
Gene Symbol:C17orf42 ( FLJ22729,MGC24674 )
Gene Full Name: chromosome 17 open reading frame 42
Band: -
Quick LinksEntrez ID:79736; OMIM: NA; Uniprot ID:CQ042_HUMAN; ENSEMBL ID: ENSG00000172171; HGNC ID:
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_024683
  • Location:chr17 26250579-26257378
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
GABP HelaGSE8489 26256770 26258185 1415 99
GABP k562GSE8489 26256770 26258185 1415 99
GABP k562GSE8489 26260121 26260296 175 2830
H3K4me3 colorectalcancer 26257797 26258185 388 613
H3ac HepG2E 26256770 26258185 1415 99
Oct1 HelaGSE14283 26259647 26259688 41 2289
P300 T30-glioblastomaGSE21026 26256855 26257973 1118 36
PHF8 HeLaGSE20725 26256999 26258078 1079 160
PHF8 Hs68plusFBSGSE20725 26256776 26258172 1396 96
RARG MCF7GSE15244 26256981 26258109 1128 167
TAFII hESGSE17917 26257238 26257630 392 56
VDR GM10861-UnstimGSE22484 26256664 26258493 1829 200
VDR GM10861-stimGSE22484 26256564 26258207 1643 7
hScc1 BcellGSE12603 26257093 26257855 762 96
hScc1 CdLSGSE12603 26257012 26258185 1173 220
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ETS1 JurkatGSE17954 26256815 26257835 1020 0
GABP k562GSE8489 26254703 26255797 1094 0
H3K4me3 colorectalcancer 26256770 26257413 643 0
TAF k562GSE8489 26256770 26257376 606 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018