Annotation Detail for CLIP4
Basic Information Top
| Gene Symbol: | CLIP4 ( FLJ21069,FLJ32705,RSNL2 ) |
|---|---|
| Gene Full Name: | CAP-GLY domain containing linker protein family, member 4 |
| Band: | 2p23.2 |
| Quick Links | Entrez ID:79745; OMIM: NA; Uniprot ID:CLIP4_HUMAN; ENSEMBL ID: ENSG00000115295; HGNC ID: 26108 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 609 | Phosphoserine. | |
| Location(AA) | Modifications | Resource |
|---|
| Location(AA) | Modification | Resource |
|---|---|---|
| 29 | Phosphothreonine(MAPK) | HMM predict |
| 36 | O-linked | HMM predict |
| 243 | Phosphothreonine(PKC) | HMM predict |
| 298 | Phosphothreonine(PKC) | HMM predict |
| 358 | N-linked | HMM predict |
| 364 | O-linked | HMM predict |
| 397 | Phosphoserine(IKK) | HMM predict |
| 402 | O-linked | HMM predict |
| 413 | Phosphothreonine(PKC) | HMM predict |
| 427 | O-linked | HMM predict |
| 430 | Phosphoserine(CK1) | HMM predict |
| 431 | O-linked | HMM predict |
| 433 | Phosphoserine(CK1) | HMM predict |
| 461 | O-linked | HMM predict |
| 469 | N-linked | HMM predict |
| 473 | O-linked | HMM predict |
| 474 | Phosphoserine(IKK) | HMM predict |
| 477 | N-linked | HMM predict |
| 478 | N-linked | HMM predict |
| 500 | Phosphothreonine(PKC) | HMM predict |
| 555 | Phosphothreonine(PKA) | HMM predict |
| 565 | Phosphoserine(CK1) | HMM predict |
| 570 | N-linked | HMM predict |
| 581 | Phosphoserine(PKB) | HMM predict |
| 581 | O-linked | HMM predict |
| 583 | O-linked | HMM predict |
| 584 | Phosphoserine(IKK) | HMM predict |
| 587 | Phosphoserine(ATM) | HMM predict |
| 587 | Phosphoserine(CK2) | HMM predict |
| 607 | Phosphoserine(PKA) | HMM predict |
| 607 | Phosphoserine(IKK) | HMM predict |
| 609 | Phosphoserine(IKK) | HMM predict |
| 688 | Phosphoserine(PKA) | HMM predict |
| 696 | N-linked | HMM predict |
- RefSeq ID: NM_024692
- Location:chr2 29191821-29260175
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| FOXA1 | MCF7 | GSE15244 | 29182672 | 29183704 | 1032 | 8634 |
| NRSF | Jurkat | GSE13047 | 29180992 | 29181532 | 540 | 10560 |
| NRSF | Jurkat | SISSRdata | 29180992 | 29181385 | 393 | 10633 |
| NRSF | mAb | Jurkat | 29180956 | 29181249 | 293 | 10719 |
| NRSF-mono | Jurkat | QuESTdata | 29180989 | 29181529 | 540 | 10563 |
| NRSF-poly | Jurkat | QuESTdata | 29181064 | 29181481 | 417 | 10549 |
| Oct1 | Hela | GSE14283 | 29175749 | 29175808 | 59 | 16043 |
| STAT1 | HeLa | GSE12783 | 29186918 | 29188076 | 1158 | 4325 |
| STAT1 | IFN | SISSRdata | 29187184 | 29187710 | 526 | 4375 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| Rb | shRbQuiescent | GSE19898 | 29260991 | 29261205 | 214 | 923 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 29191359 | 29192503 | 1144 | 0 |
| FOXA1 | MCF7 | GSE15244 | 29194047 | 29194862 | 815 | 0 |
| FOXA1 | MCF7 | GSE15244 | 29241904 | 29242498 | 594 | 0 |
| FoxA1 | MCF7 | MACSdata | 29200134 | 29200318 | 184 | 0 |
| FoxA1 | MCF7 | MACSdata | 29241879 | 29242218 | 339 | 0 |
| Oct1 | Hela | GSE14283 | 29247348 | 29247374 | 26 | 0 |
| Oct1 | Hela | GSE14283 | 29253887 | 29253915 | 28 | 0 |
| P300 | T30-glioblastoma | GSE21026 | 29241683 | 29242472 | 789 | 0 |
| RARA | MCF7 | GSE15244 | 29194047 | 29194862 | 815 | 0 |
| hScc1 | Bcell | GSE12603 | 29191648 | 29192276 | 628 | 0 |
| hScc1 | G2 | GSE9613 | 29191359 | 29192467 | 1108 | 0 |
| p130 | Senescent | GSE19898 | 29192486 | 29193168 | 682 | 0 |
Validated miRNA targets