Annotation Detail for SHCBP1
Basic Information Top
| Gene Symbol: | SHCBP1 ( FLJ22009,MGC26900,PAL ) |
|---|---|
| Gene Full Name: | SHC SH2-domain binding protein 1 |
| Band: | 16q11.2 |
| Quick Links | Entrez ID:79801; OMIM: 611027; Uniprot ID:SHCBP_HUMAN; ENSEMBL ID: ENSG00000171241; HGNC ID: 29547 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 31 | Phosphoserine. | |
| 42 | Phosphoserine. | |
| 44 | Phosphoserine. | |
| 47 | Phosphoserine. | |
| 273 | Phosphoserine. | |
| 634 | Phosphoserine. | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 31 | Phosphoserine. | Swiss-Prot 53.0 |
| 42 | Phosphoserine. | Swiss-Prot 53.0 |
| 42 | Phosphoserine | Phospho.ELM 6.0 |
| 406 | Phosphotyrosine | Phospho.ELM 6.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 42 | Phosphoserine(IKK) | HMM predict |
| 152 | Phosphoserine(IKK) | HMM predict |
| 217 | Sulfotyrosine | HMM predict |
| 217 | Phosphotyrosine(Abl) | HMM predict |
| 217 | Phosphotyrosine(SRC) | HMM predict |
| 217 | Phosphotyrosine(EGFR) | HMM predict |
| 269 | Phosphoserine(IKK) | HMM predict |
| 273 | Phosphoserine(CK1) | HMM predict |
| 289 | Phosphotyrosine(INSR) | HMM predict |
| 406 | Phosphotyrosine(INSR) | HMM predict |
| 634 | Phosphoserine(PKA) | HMM predict |
- RefSeq ID: NM_024745
- Location:chr16 45171970-45212784
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CBP | T0-glioblastoma | GSE21026 | 45229023 | 45229574 | 551 | 16514 |
| CTCF | G2 | GSE9613 | 45214734 | 45215454 | 720 | 2310 |
| CTCF | G2 | GSE9613 | 45220822 | 45221122 | 300 | 8188 |
| Fos | K562 | GSE19551 | 45212643 | 45213208 | 565 | 141 |
| NRSF | pAb | Jurkat | 45217068 | 45217686 | 618 | 4593 |
| Oct1 | H2O2-Hela | GSE14283 | 45221377 | 45221404 | 27 | 8606 |
| Oct1 | Hela | GSE14283 | 45221376 | 45221432 | 56 | 8620 |
| Pol2 | GM12878 | GSE19551 | 45224305 | 45224862 | 557 | 11799 |
| TAF | Hela | GSE8489 | 45213617 | 45213962 | 345 | 1005 |
| TFAP2C | MCF7 | GSE21234 | 45212736 | 45213312 | 576 | 240 |
| hScc1 | Bcell | GSE12603 | 45214413 | 45214990 | 577 | 1917 |
| p130 | shRbSenescent | GSE19898 | 45220919 | 45221400 | 481 | 8375 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 45199083 | 45199267 | 184 | 0 |
| CTCF | CD4 | SISSRdata | 45199083 | 45199267 | 184 | 0 |
| CTCF | G2 | GSE9613 | 45212404 | 45212906 | 502 | 0 |
| E2F4 | G0 | GSE7516 | 45212074 | 45213001 | 927 | 0 |
| LIN54 | G0 | GSE7516 | 45212074 | 45213001 | 927 | 0 |
| LIN9 | G0 | GSE7516 | 45212074 | 45213001 | 927 | 0 |
| LIN9 | S | GSE7516 | 45212074 | 45213001 | 927 | 0 |
| Oct1 | H2O2-Hela | GSE14283 | 45186007 | 45186035 | 28 | 0 |
| P300 | T30-glioblastoma | GSE21026 | 45212302 | 45213206 | 904 | 0 |
| PHF8 | 293T | GSE20725 | 45212094 | 45212946 | 852 | 0 |
| PHF8 | HeLa | GSE20725 | 45212138 | 45212911 | 773 | 0 |
| TAF | Hela | GSE8489 | 45212074 | 45212659 | 585 | 0 |
| TAF | k562 | GSE8489 | 45212074 | 45212539 | 465 | 0 |
| TAFII | hES | GSE17917 | 45212485 | 45213068 | 583 | 0 |
| hScc1 | Bcell | GSE12603 | 45212504 | 45212906 | 402 | 0 |
| hScc1 | CdLS | GSE12603 | 45198893 | 45199151 | 258 | 0 |
| hScc1 | CdLS | GSE12603 | 45212441 | 45212906 | 465 | 0 |
| p130 | Quiescent | GSE19898 | 45212200 | 45212933 | 733 | 0 |
| p130 | Senescent | GSE19898 | 45212176 | 45212999 | 823 | 0 |
| p130 | shRbQuiescent | GSE19898 | 45212165 | 45212988 | 823 | 0 |
| p130 | shRbSenescent | GSE19898 | 45212105 | 45213085 | 980 | 0 |
| p130 | G0 | GSE7516 | 45212074 | 45213001 | 927 | 0 |
| p130 | S | GSE7516 | 45212120 | 45213001 | 881 | 0 |
Validated miRNA targets