Annotation Detail for HPS6
Basic Information Top
| Gene Symbol: | HPS6 ( FLJ22501,MGC20522,RP11-302K17.1 ) |
|---|---|
| Gene Full Name: | Hermansky-Pudlak syndrome 6 |
| Band: | 10q24.32 |
| Quick Links | Entrez ID:79803; OMIM: 607522; Uniprot ID:HPS6_HUMAN; ENSEMBL ID: ENSG00000166189; HGNC ID: 18817 |
| Relate to Another Database: | SFARIGene; denovo-db |
| No data |
| No data |
| Location(AA) | Modification | Resource |
|---|---|---|
| 6 | Phosphothreonine(PKC) | HMM predict |
| 6 | Phosphothreonine(PKA) | HMM predict |
| 37 | Phosphoserine(CDC2) | HMM predict |
| 152 | O-linked | HMM predict |
| 154 | Phosphoserine(CDC2) | HMM predict |
| 205 | O-linked | HMM predict |
| 207 | O-linked | HMM predict |
| 263 | Phosphoserine(CDC2) | HMM predict |
| 276 | Phosphothreonine(CDK) | HMM predict |
| 422 | Phosphothreonine(MAPK) | HMM predict |
| 537 | Phosphoserine(ATM) | HMM predict |
| 571 | S-palmitoyl | HMM predict |
| 573 | S-palmitoyl | HMM predict |
| 720 | O-linked | HMM predict |
| 720 | Phosphothreonine(MAPK) | HMM predict |
| 765 | O-linked | HMM predict |
| 766 | Phosphothreonine(MAPK) | HMM predict |
| 766 | Phosphothreonine(CDC2) | HMM predict |
| 766 | Phosphothreonine(CDK) | HMM predict |
| 770 | Phosphothreonine(MAPK) | HMM predict |
| 770 | Phosphothreonine(CDK) | HMM predict |
| 771 | Proline | HMM predict |
- RefSeq ID: NM_024747
- Location:chr10 103815136-103817781
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| ETS1 | Jurkat | GSE17954 | 103805129 | 103806602 | 1473 | 9271 |
| ETS1 | Jurkat | GSE17954 | 103814447 | 103815630 | 1183 | 98 |
| H3K4me2 | HCT116 | GSE10453 | 103804165 | 103804421 | 256 | 10844 |
| H3ac | HepG2 | E | 103802286 | 103803380 | 1094 | 12304 |
| H3ac | HepG2 | E | 103804165 | 103804421 | 256 | 10844 |
| Nanog | hES | GSE18292 | 103797078 | 103797238 | 160 | 17979 |
| P300 | T0-glioblastoma | GSE21026 | 103805533 | 103806534 | 1001 | 9103 |
| P300 | T30-glioblastoma | GSE21026 | 103805510 | 103806560 | 1050 | 9102 |
| Rb | Growing | GSE19898 | 103805913 | 103806047 | 134 | 9157 |
| Rb | Senescent | GSE19898 | 103805839 | 103806156 | 317 | 9139 |
| Rb | shRbSenescence | GSE19898 | 103805834 | 103806069 | 235 | 9185 |
| TAF | Hela | GSE8489 | 103813817 | 103814307 | 490 | 1075 |
| USF1 | HepG2 | E | 103809448 | 103810002 | 554 | 5412 |
| hScc1 | Bcell | GSE12603 | 103805656 | 103806074 | 418 | 9272 |
| hScc1 | CdLS | GSE12603 | 103805089 | 103806130 | 1041 | 9527 |
| hScc1 | G2 | GSE9613 | 103805407 | 103806074 | 667 | 9396 |
| p130 | Quiescent | GSE19898 | 103805335 | 103805694 | 359 | 9622 |
| p130 | Senescent | GSE19898 | 103805840 | 103806336 | 496 | 9049 |
| p130 | shRbQuiescent | GSE19898 | 103805238 | 103805772 | 534 | 9632 |
| p130 | shRbQuiescent | GSE19898 | 103805859 | 103806391 | 532 | 9012 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 103822731 | 103822957 | 226 | 5063 |
| CTCF | CD4 | SISSRdata | 103822731 | 103822957 | 226 | 5063 |
| Fos | K562 | GSE19551 | 103822595 | 103823058 | 463 | 5045 |
| hScc1 | Bcell | GSE12603 | 103822570 | 103823049 | 479 | 5028 |
| hScc1 | Bcell | GSE12603 | 103826196 | 103826361 | 165 | 8497 |
| hScc1 | CdLS | GSE12603 | 103822570 | 103823147 | 577 | 5077 |
| hScc1 | G2 | GSE9613 | 103822570 | 103823006 | 436 | 5007 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| PHF8 | HeLa | GSE20725 | 103814731 | 103815878 | 1147 | 0 |
| PHF8 | Hs68plusFBS | GSE20725 | 103814586 | 103815958 | 1372 | 0 |
| hScc1 | Bcell | GSE12603 | 103815517 | 103815985 | 468 | 0 |
| hScc1 | Bcell | GSE12603 | 103817120 | 103817487 | 367 | 0 |
| p130 | Senescent | GSE19898 | 103817081 | 103817239 | 158 | 0 |
Validated miRNA targets