Annotation Detail for TMC5
Basic Information Top
| Gene Symbol: | TMC5 ( FLJ13593 ) |
|---|---|
| Gene Full Name: | transmembrane channel-like 5 |
| Band: | 16p12.3 |
| Quick Links | Entrez ID:79838; OMIM: NA; Uniprot ID:TMC5_HUMAN; ENSEMBL ID: ENSG00000103534; HGNC ID: 22999 |
| Relate to Another Database: | SFARIGene; denovo-db |
| No data |
| No data |
| Location(AA) | Modification | Resource |
|---|---|---|
| 8 | N-linked | HMM predict |
| 16 | Sulfotyrosine | HMM predict |
| 19 | Sulfotyrosine | HMM predict |
| 22 | Phosphoserine(ATM) | HMM predict |
| 24 | N-linked | HMM predict |
| 29 | Phosphotyrosine(Jak) | HMM predict |
| 35 | Phosphotyrosine(Syk) | HMM predict |
| 35 | Phosphotyrosine(EGFR) | HMM predict |
| 47 | Sulfotyrosine | HMM predict |
| 55 | Phosphotyrosine(SRC) | HMM predict |
| 61 | Phosphothreonine(PKC) | HMM predict |
| 65 | Sulfotyrosine | HMM predict |
| 74 | Phosphotyrosine(EGFR) | HMM predict |
| 91 | Phosphotyrosine(SRC) | HMM predict |
| 95 | O-linked | HMM predict |
| 103 | O-linked | HMM predict |
| 104 | O-linked | HMM predict |
| 110 | Phosphotyrosine(SRC) | HMM predict |
| 110 | Sulfotyrosine | HMM predict |
| 118 | Phosphotyrosine(Jak) | HMM predict |
| 122 | O-linked | HMM predict |
| 131 | Phosphoserine(ATM) | HMM predict |
| 140 | Phosphoserine(CK2) | HMM predict |
| 225 | Phosphotyrosine(INSR) | HMM predict |
| 225 | Phosphotyrosine(EGFR) | HMM predict |
| 225 | Sulfotyrosine | HMM predict |
| 243 | Phosphotyrosine(INSR) | HMM predict |
| 243 | Phosphotyrosine(EGFR) | HMM predict |
| 243 | Phosphotyrosine(SRC) | HMM predict |
| 244 | Phosphoserine(CK2) | HMM predict |
| 252 | Phosphotyrosine(INSR) | HMM predict |
| 252 | Sulfotyrosine | HMM predict |
| 257 | Phosphothreonine(CDK) | HMM predict |
| 257 | Phosphothreonine(CDC2) | HMM predict |
| 270 | Phosphoserine(PKB) | HMM predict |
| 270 | Phosphoserine(IKK) | HMM predict |
| 292 | Phosphotyrosine(EGFR) | HMM predict |
| 319 | Phosphotyrosine(INSR) | HMM predict |
| 334 | Phosphotyrosine(Abl) | HMM predict |
| 347 | Phosphoserine(CDC2) | HMM predict |
| 402 | S-palmitoyl | HMM predict |
| 403 | S-palmitoyl | HMM predict |
| 420 | Phosphoserine(PKG) | HMM predict |
| 483 | Phosphothreonine(PKC) | HMM predict |
| 510 | N-linked | HMM predict |
| 542 | Phosphoserine(CDK) | HMM predict |
| 765 | Phosphoserine(MAPK) | HMM predict |
| 965 | N-linked | HMM predict |
| 998 | Phosphoserine(PKG) | HMM predict |
- RefSeq ID: NM_024780
- Location:chr16 19375272-19417578
- strand:+
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| p63 | keratinocytes | GSE17611 | 19418230 | 19418989 | 759 | 1031 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 19391651 | 19391860 | 209 | 0 |
| CTCF | G2 | GSE9613 | 19405693 | 19406073 | 380 | 0 |
| FOXA1 | MCF7 | GSE15244 | 19382124 | 19382746 | 622 | 0 |
| Fos | K562 | GSE19551 | 19377671 | 19378202 | 531 | 0 |
| FoxA1 | MCF7 | MACSdata | 19382348 | 19382610 | 262 | 0 |
| Gata1 | K562 | GSE18868 | 19406579 | 19407234 | 655 | 0 |
| Gata2 | K562 | GSE18868 | 19406609 | 19407263 | 654 | 0 |
| Nanog | hES | GSE18292 | 19404553 | 19404818 | 265 | 0 |
| Oct1 | Hela | GSE14283 | 19404988 | 19405017 | 29 | 0 |
| Sox2 | hES | GSE18292 | 19404493 | 19404881 | 388 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 9689 | mRNA | TMC5 | chr16 | 19375272 | 19417579 | 204 | EST | chr16 | 19395738 | 19406722 | Sense/Antisense (SA) pairs | |