Annotation Detail for SNX22
Basic Information Top
| Gene Symbol: | SNX22 ( FLJ13952 ) |
|---|---|
| Gene Full Name: | sorting nexin 22 |
| Band: | 15q22.31 |
| Quick Links | Entrez ID:79856; OMIM: NA; Uniprot ID:SNX22_HUMAN; ENSEMBL ID: ENSG00000157734; HGNC ID: 16315 |
| Relate to Another Database: | SFARIGene; denovo-db |
| No data |
| No data |
| Location(AA) | Modification | Resource |
|---|---|---|
| 19 | Phosphoserine(CDC2) | HMM predict |
| 39 | Phosphothreonine(PKC) | HMM predict |
| 86 | Phosphotyrosine(INSR) | HMM predict |
| 132 | Phosphoserine(ATM) | HMM predict |
| 150 | N-linked | HMM predict |
| 152 | Phosphoserine(CDC2) | HMM predict |
| 152 | Phosphoserine(MAPK) | HMM predict |
| 155 | Phosphoserine(IKK) | HMM predict |
| 174 | Phosphoserine(CDC2) | HMM predict |
| 184 | S-farnesyl | HMM predict |
| 190 | Proline | HMM predict |
- RefSeq ID: NM_024798
- Location:chr15 62230968-62236732
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 62228761 | 62229057 | 296 | 2060 |
| H3ac | HepG2 | E | 62227340 | 62227552 | 212 | 3523 |
| TFAP2C | MCF7 | GSE21234 | 62228545 | 62229023 | 478 | 2185 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 62232846 | 62233102 | 256 | 0 |
| CTCF | CD4 | SISSRdata | 62232846 | 62233102 | 256 | 0 |
| CTCF | Jurkat | GSE12889 | 62232771 | 62233179 | 408 | 0 |
| CTCF | G2 | GSE9613 | 62231490 | 62232199 | 709 | 0 |
| CTCF | G2 | GSE9613 | 62232776 | 62233236 | 460 | 0 |
| PHF8 | 293T | GSE20725 | 62230654 | 62231574 | 920 | 0 |
| Rb | Quiescent | GSE19898 | 62232734 | 62233093 | 359 | 0 |
| Rb | Senescent | GSE19898 | 62232803 | 62233135 | 332 | 0 |
| Rb | shRbQuiescent | GSE19898 | 62232748 | 62233003 | 255 | 0 |
| hScc1 | Bcell | GSE12603 | 62230770 | 62232199 | 1429 | 0 |
| hScc1 | Bcell | GSE12603 | 62232707 | 62233695 | 988 | 0 |
| p130 | Senescent | GSE19898 | 62232772 | 62233190 | 418 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8936 | HTC | SNX22 | chr15 | 62232731 | 62236732 | 515 | mRNA | PPIB | chr15 | 62235067 | 62242407 | Sense/Antisense (SA) pairs |