AutismKB 2.0

Annotation Detail for CPSF7


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Basic Information Top
Gene Symbol:CPSF7 ( FLJ12529,FLJ39024,MGC9315 )
Gene Full Name: cleavage and polyadenylation specific factor 7, 59kDa
Band: 11q12.2
Quick LinksEntrez ID:79869; OMIM: NA; Uniprot ID:CPSF7_HUMAN; ENSEMBL ID: ENSG00000149532; HGNC ID: 30098
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
48Phosphoserine.
72Phosphotyrosine.
73Phosphothreonine.
197Phosphoserine.
203Phosphothreonine.
413Phosphoserine.
423Phosphoserine.
429Phosphoserine.
Location(AA) Modifications Resource
72Phosphotyrosine.Swiss-Prot 53.0
72PhosphotyrosinePhospho.ELM 6.0
73Phosphothreonine.Swiss-Prot 53.0
73PhosphothreoninePhospho.ELM 6.0
203Phosphothreonine (By similarity).Swiss-Prot 53.0
423Phosphoserine.Swiss-Prot 53.0
423PhosphoserinePhospho.ELM 6.0
427PhosphoserinePhospho.ELM 6.0
429Phosphoserine.Swiss-Prot 53.0
429PhosphoserinePhospho.ELM 6.0
Location(AA) Modification Resource
11SulfotyrosineHMM predict
11Phosphotyrosine(Jak)HMM predict
23N-linkedHMM predict
24N-linkedHMM predict
39Phosphoserine(ATM)HMM predict
46Phosphoserine(CK1)HMM predict
47Phosphoserine(CK1)HMM predict
47O-linkedHMM predict
47O-linkedHMM predict
48O-linkedHMM predict
49O-linkedHMM predict
60Phosphoserine(CDC2)HMM predict
60O-linkedHMM predict
65N-linkedHMM predict
108Phosphotyrosine(SRC)HMM predict
166Phosphoserine(ATM)HMM predict
191Phosphoserine(IKK)HMM predict
194Phosphoserine(CK1)HMM predict
195Phosphoserine(CK2)HMM predict
195Phosphoserine(ATM)HMM predict
195Phosphoserine(CK1)HMM predict
203Phosphothreonine(MAPK)HMM predict
249O-linkedHMM predict
249O-linkedHMM predict
250O-linkedHMM predict
263SulfotyrosineHMM predict
300N-linkedHMM predict
302O-linkedHMM predict
310Phosphotyrosine(Syk)HMM predict
310Phosphotyrosine(INSR)HMM predict
350O-linkedHMM predict
364Phosphotyrosine(INSR)HMM predict
413Phosphoserine(IKK)HMM predict
427Phosphoserine(IKK)HMM predict
427PhosphoserineHMM predict
427Phosphoserine(CDC2)HMM predict
429PhosphoserineHMM predict
451Phosphotyrosine(Jak)HMM predict
451SulfotyrosineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_024811
  • Location:chr11 60926778-60953848
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
PHF8 HeLaGSE20725 60953211 60954719 1508 117
PHF8 Hs68plusFBSGSE20725 60953125 60954880 1755 154
hScc1 BcellGSE12603 60953578 60954142 564 12
hScc1 CdLSGSE12603 60953578 60954142 564 12
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 60953486 60953606 120 0
CTCF CD4SISSRdata 60953486 60953606 120 0
ER E2-MCF7GSE14664 60938473 60938515 42 0
ER E2-MCF7GSE14664 60951948 60952003 55 0
ER Fulvestrant-MCF7GSE14664 60951950 60952009 59 0
GABP k562GSE8489 60952893 60953358 465 0
H3ac HepG2E 60952540 60953284 744 0
NRSF pAbJurkat 60953618 60953957 339 0
Oct1 HelaGSE14283 60950927 60950958 31 0
Oct1 HelaGSE14283 60951952 60952003 51 0
PHF8 Hs68minusFBSGSE20725 60953175 60954414 1239 0
Rb shRbSenescenceGSE19898 60948844 60949084 240 0
TAF HelaGSE8489 60952965 60953324 359 0
p130 QuiescentGSE19898 60953598 60954025 427 0
p130 SenescentGSE19898 60953616 60953976 360 0
p130 shRbQuiescentGSE19898 60953502 60953804 302 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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