AutismKB 2.0

Annotation Detail for HDAC11


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Basic Information Top
Gene Symbol:HDAC11 ( FLJ22237,HD11 )
Gene Full Name: histone deacetylase 11
Band: 3p25.1
Quick LinksEntrez ID:79885; OMIM: 607226; Uniprot ID:HDA11_HUMAN; ENSEMBL ID: ENSG00000163517; HGNC ID: 19086
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
25N-linkedHMM predict
67PhosphoserineHMM predict
67Phosphoserine(CK1)HMM predict
146Phosphoserine(CK1)HMM predict
155Phosphotyrosine(Syk)HMM predict
209SulfotyrosineHMM predict
234Phosphotyrosine(EGFR)HMM predict
234PhosphotyrosineHMM predict
234Phosphotyrosine(Syk)HMM predict
274Phosphoserine(CDC2)HMM predict
274Phosphoserine(ATM)HMM predict
331Phosphoserine(CK1)HMM predict
331Phosphoserine(CK2)HMM predict
331Phosphoserine(IKK)HMM predict
333O-linkedHMM predict
339Phosphothreonine(CDK)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_024827
  • Location:chr3 13496823-13521833
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 13478119 13478476 357 18526
CTCF CD4SISSRdata 13478119 13478476 357 18526
CTCF G2GSE9613 13477860 13478656 796 18566
CTCF G2GSE9613 13494687 13495117 430 1922
CTCF G2GSE9613 13495935 13497260 1325 226
ER MCF7GSE19013 13491931 13493419 1488 4149
FOXA1 MCF7GSE15244 13477169 13478273 1104 19103
FOXA1 MCF7GSE15244 13487268 13487664 396 9358
FOXA1 MCF7GSE15244 13492331 13492938 607 4189
Fos K562GSE19551 13496321 13496835 514 246
FoxA1 MCF7MACSdata 13492419 13492959 540 4135
H3ac HepG2E 13494173 13494935 762 2270
HIF1 HypoHepG2 13487268 13487664 396 9358
RARA MCF7GSE15244 13477709 13478237 528 18851
RARA MCF7GSE15244 13487268 13487664 396 9358
RARA MCF7GSE15244 13492187 13492938 751 4261
RARG MCF7GSE15244 13492187 13492938 751 4261
Rb QuiescentGSE19898 13496434 13496749 315 232
Rb SenescentGSE19898 13496359 13496755 396 267
Rb shRbSenescenceGSE19898 13496623 13496781 158 122
USF1 HepG2E 13477780 13478273 493 18797
USF1 HepG2E 13494173 13494968 795 2253
hScc1 BcellGSE12603 13477962 13478350 388 18668
hScc1 BcellGSE12603 13495896 13497212 1316 270
hScc1 CdLSGSE12603 13477860 13478485 625 18651
hScc1 G2GSE9613 13477890 13478619 729 18569
p130 QuiescentGSE19898 13496482 13496707 225 229
p130 SenescentGSE19898 13496320 13496762 442 283
p130 shRbQuiescentGSE19898 13495911 13496670 759 533
p130 shRbSenescentGSE19898 13496309 13496785 476 277
p63 keratinocytesGSE17611 13491147 13491977 830 5262
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 13523145 13523456 311 1467
CTCF G2GSE9613 13525602 13525785 183 3860
CTCF G2GSE9613 13533886 13534558 672 12389
CTCF G2GSE9613 13535267 13535446 179 13523
CTCF G2GSE9613 13537138 13537530 392 15501
ER MCF7GSE19013 13524326 13524800 474 2730
ER MCF7GSE19013 13530549 13531410 861 9146
FOXA1 MCF7GSE15244 13530133 13530916 783 8691
RARG MCF7GSE15244 13530019 13530916 897 8634
TFAP2C MCF7GSE21234 13523648 13524989 1341 2485
TFAP2C MCF7GSE21234 13530010 13531303 1293 8823
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 13512767 13513143 376 0
CTCF CD4SISSRdata 13512767 13513143 376 0
CTCF HelaGSE12889 13516682 13516928 246 0
CTCF G2GSE9613 13498213 13498559 346 0
CTCF G2GSE9613 13510667 13513220 2553 0
CTCF G2GSE9613 13516528 13517170 642 0
CTCF G2GSE9613 13517557 13517703 146 0
CTCF G2GSE9613 13518200 13518450 250 0
CTCF G2GSE9613 13520325 13521480 1155 0
ER E2-MCF7GSE14664 13508437 13508478 41 0
FOXA1 MCF7GSE15244 13512058 13513136 1078 0
H3ac HepG2E 13501217 13501482 265 0
Myc K562GSE19551 13501423 13502112 689 0
Myc K562GSE19551 13516591 13517134 543 0
Oct1 H2O2-HelaGSE14283 13508443 13508478 35 0
Oct1 HelaGSE14283 13508443 13508478 35 0
RARA MCF7GSE15244 13512387 13513028 641 0
RARG MCF7GSE15244 13512307 13513028 721 0
TFAP2C MCF7GSE21234 13520554 13521489 935 0
hScc1 BcellGSE12603 13511293 13512307 1014 0
hScc1 BcellGSE12603 13512566 13513322 756 0
hScc1 CdLSGSE12603 13512675 13513286 611 0
hScc1 G2GSE9613 13496994 13497260 266 0
hScc1 G2GSE9613 13510747 13511694 947 0
hScc1 G2GSE9613 13512675 13513365 690 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
17780 HTC HDAC11 chr3 13496223 13521834 330 EST chr3 13493486 13496553Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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