Annotation Detail for C9orf82
Basic Information Top
| Gene Symbol: | C9orf82 ( FLJ13657,RP11-337A23.1 ) |
|---|---|
| Gene Full Name: | chromosome 9 open reading frame 82 |
| Band: | 9p21.2 |
| Quick Links | Entrez ID:79886; OMIM: NA; Uniprot ID:CI082_HUMAN; ENSEMBL ID: ENSG00000120159; HGNC ID: |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 90 | Phosphothreonine. | |
| 92 | Phosphoserine. | |
| 94 | Phosphoserine. | |
| 203 | Phosphoserine. | |
| 221 | Phosphoserine. | |
| 312 | Phosphoserine. | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 203 | Phosphoserine. | Swiss-Prot 53.0 |
| 203 | Phosphoserine | Phospho.ELM 6.0 |
| 312 | Phosphoserine (By similarity). | Swiss-Prot 53.0 |
| 312 | Phosphoserine | Phospho.ELM 6.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 15 | Phosphoserine(PKG) | HMM predict |
| 15 | Phosphoserine(PKA) | HMM predict |
| 16 | Phosphoserine(PKG) | HMM predict |
| 16 | Phosphoserine(PKA) | HMM predict |
| 36 | O-linked | HMM predict |
| 37 | O-linked | HMM predict |
| 37 | O-linked | HMM predict |
| 39 | Phosphoserine(IKK) | HMM predict |
| 39 | O-linked | HMM predict |
| 40 | O-linked | HMM predict |
| 41 | Phosphoserine(IKK) | HMM predict |
| 41 | O-linked | HMM predict |
| 59 | N-linked | HMM predict |
| 89 | Phosphoserine(PKA) | HMM predict |
| 90 | Phosphothreonine(PKA) | HMM predict |
| 92 | O-linked | HMM predict |
| 94 | Phosphoserine(CK1) | HMM predict |
| 94 | Phosphoserine(IKK) | HMM predict |
| 96 | Phosphoserine(IKK) | HMM predict |
| 120 | Phosphoserine(CK2) | HMM predict |
| 152 | S-palmitoyl | HMM predict |
| 221 | Phosphoserine(ATM) | HMM predict |
| 232 | Phosphoserine(CK1) | HMM predict |
| 264 | Phosphoserine(CK2) | HMM predict |
| 352 | Methionine | HMM predict |
- RefSeq ID: NM_024828
- Location:chr9 26830683-26882724
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| GABP | k562 | GSE8489 | 26882873 | 26883776 | 903 | 600 |
| H3ac | HepG2 | E | 26882901 | 26883358 | 457 | 405 |
| TAF | Hela | GSE8489 | 26882833 | 26883706 | 873 | 545 |
| TAF | k562 | GSE8489 | 26882765 | 26883776 | 1011 | 546 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| SRF | Hela | GSE8489 | 26821008 | 26821300 | 292 | 9530 |
| TFAP2C | MCF7 | GSE21234 | 26823836 | 26824233 | 397 | 6649 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CBP | T30-glioblastoma | GSE21026 | 26882220 | 26883183 | 963 | 0 |
| CTCF | CD4 | GSE12889 | 26882267 | 26882542 | 275 | 0 |
| CTCF | CD4 | SISSRdata | 26882267 | 26882542 | 275 | 0 |
| ETS1 | Jurkat | GSE17954 | 26881986 | 26883257 | 1271 | 0 |
| GABP | k562 | GSE8489 | 26881546 | 26882343 | 797 | 0 |
| H3K4me3 | colorectal | cancer | 26881511 | 26882141 | 630 | 0 |
| H3ac | HepG2 | E | 26881511 | 26882406 | 895 | 0 |
| PHF8 | HeLa | GSE20725 | 26881955 | 26883223 | 1268 | 0 |
| Pol2 | GM12878 | GSE19551 | 26882060 | 26883228 | 1168 | 0 |
| PolII | HeLa | GSE12783 | 26881347 | 26883813 | 2466 | 0 |
| TAF | Hela | GSE8489 | 26881511 | 26882302 | 791 | 0 |
| TAF | k562 | GSE8489 | 26879887 | 26880059 | 172 | 0 |
| TAF | k562 | GSE8489 | 26881511 | 26882343 | 832 | 0 |
| hScc1 | Bcell | GSE12603 | 26882068 | 26882621 | 553 | 0 |
Validated miRNA targets