Annotation Detail for GGNBP2

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Basic Information Top

Gene Symbol:	GGNBP2 ( DIF-3,DIF3,FLJ21230,FLJ22561,FLJ42090,LCRG1,LZK1,ZFP403,ZNF403 )
Gene Full Name:	gametogenetin binding protein 2
Band:	17q12
Quick Links	Entrez ID:79893; OMIM: 612275; Uniprot ID:GGNB2_HUMAN; ENSEMBL ID: ENSG00000005955; HGNC ID: 19357
Relate to Another Database:	SFARIGene; denovo-db

Pathways, Diseases and Drugs

TF binding site

Post Translation Modification

PTM Sites from Uniprot:1 results
Experimental PTM Sites from dbPTM:0 results
Predicted PTM Sites by profile HMM from dbPTM:0 results

Location(AA)	Modification
360	Phosphoserine.

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

RefSeq ID: NM_024835
Location:chr17 31974916-32020386
strand:+

Upstream the gene:6 results
Downstream the gene:0 results
Inside the gene:16 results

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	G2	GSE9613	31974615	31975038	423	90
H3K4me3	colorectal	cancer	31973898	31974472	574	732
H3ac	HepG2	E	31973898	31974546	648	695
TAF	Hela	GSE8489	31973898	31974331	433	802
TAF	k562	GSE8489	31973898	31974438	540	749
p130	shRbQuiescent	GSE19898	31973810	31974676	866	674

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
ETS1	Jurkat	GSE17954	31974240	31976091	1851	0
Fos	K562	GSE19551	31975147	31975738	591	0
H3K4me3	colorectal	cancer	31976177	31976807	630	0
H3ac	HepG2	E	31975857	31977648	1791	0
Oct1	Hela	GSE14283	31979079	31979118	39	0
Oct1	Hela	GSE14283	32010213	32010252	39	0
PHF8	293T	GSE20725	31974029	31976289	2260	0
PHF8	HeLa	GSE20725	31973805	31976387	2582	0
PHF8	Hs68minusFBS	GSE20725	31975407	31976299	892	0
PHF8	Hs68plusFBS	GSE20725	31973742	31976396	2654	0
Pol2	GM12878	GSE19551	31973900	31976085	2185	0
hScc1	Bcell	GSE12603	31974546	31975564	1018	0
hScc1	Bcell	GSE12603	32004690	32005119	429	0
hScc1	CdLS	GSE12603	31974546	31975564	1018	0
hScc1	CdLS	GSE12603	31997567	31997853	286	0
p130	shRbSenescent	GSE19898	31975299	31976376	1077	0

Validated miRNA targets

Cis-Nats regulation

Simple Query:

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

Studies: 1,036
Genes: 1,379
CNVs/SVs: 5,420
SNVs/Indels: 11,669
de novo Mutations: 5,669
Mosaics: 789
Linkage Regions: 172

Paper Collected: 6/30/2018

Last Update: 8/26/2018

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