AutismKB 2.0

Annotation Detail for TNIP3


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Basic Information Top
Gene Symbol:TNIP3 ( ABIN-3,FLJ21162,LIND )
Gene Full Name: TNFAIP3 interacting protein 3
Band: 4q27
Quick LinksEntrez ID:79931; OMIM: 608019; Uniprot ID:TNIP3_HUMAN; ENSEMBL ID: ENSG00000050730; HGNC ID: 19315
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
16Phosphoserine(CK2)HMM predict
35PhosphoserineHMM predict
113Phosphothreonine(PKC)HMM predict
155Phosphotyrosine(INSR)HMM predict
155Phosphotyrosine(EGFR)HMM predict
232N-linkedHMM predict
268S-palmitoylHMM predict
290Phosphoserine(IKK)HMM predict
291N-linkedHMM predict
317TyrosineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_024873
  • Location:chr4 122272016-122304925
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Nanog hESGSE18292 122318169 122318757 588 13538
Oct1 H2O2-HelaGSE14283 122322491 122322526 35 17583
Oct1 HelaGSE14283 122322492 122322526 34 17584
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 122253213 122253367 154 18727
CTCF CD4SISSRdata 122253213 122253367 154 18727
CTCF G2GSE9613 122266115 122266327 212 5796
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T30-glioblastomaGSE21026 122296480 122297143 663 0
P300 T0-glioblastomaGSE21026 122296329 122297308 979 0
P300 T30-glioblastomaGSE21026 122296255 122297211 956 0
VDR GM10861-stimGSE22484 122279564 122280998 1434 0
Validated miRNA targets Top
Cis-Nats regulation Top

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Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018