AutismKB 2.0

Annotation Detail for CNTNAP3


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Basic Information Top
Gene Symbol:CNTNAP3 ( CASPR3,CNTNAP3A,RP11-138L21.1,RP11-290L7.1 )
Gene Full Name: contactin associated protein-like 3
Band: 9p12
Quick LinksEntrez ID:79937; OMIM: 610517; Uniprot ID:CNTP3_HUMAN; ENSEMBL ID: ENSG00000106714; HGNC ID: 13834
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
285N-linked (GlcNAc...) (Potential).
359N-linked (GlcNAc...) (Potential).
441N-linked (GlcNAc...) (Potential).
497N-linked (GlcNAc...) (Potential).
623N-linked (GlcNAc...) (Potential).
706N-linked (GlcNAc...) (Potential).
1023N-linked (GlcNAc...) (Potential).
1073N-linked (GlcNAc...) (Potential).
1120N-linked (GlcNAc...) (Potential).
Location(AA) Modifications Resource
285N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
359N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
441N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
497N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
623N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
706N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
1023N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
1073N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
1120N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
Location(AA) Modification Resource
33Phosphoserine(IKK)HMM predict
51Phosphoserine(CK1)HMM predict
52Phosphoserine(CK1)HMM predict
285N-linkedHMM predict
303Phosphotyrosine(EGFR)HMM predict
317Phosphothreonine(MAPK)HMM predict
317Phosphothreonine(CDK)HMM predict
441N-linkedHMM predict
497N-linkedHMM predict
505Phosphoserine(CDK)HMM predict
505Phosphoserine(CDC2)HMM predict
563Phosphoserine(ATM)HMM predict
600N-linkedHMM predict
692Phosphoserine(IKK)HMM predict
706N-linkedHMM predict
754Phosphoserine(ATM)HMM predict
778SulfotyrosineHMM predict
823O-linkedHMM predict
869Phosphothreonine(MAPK)HMM predict
951Phosphothreonine(MAPK)HMM predict
963O-linkedHMM predict
991Phosphotyrosine(Syk)HMM predict
1023N-linkedHMM predict
1024Phosphoserine(CK1)HMM predict
1026Phosphoserine(IKK)HMM predict
1026Phosphoserine(CK1)HMM predict
1049O-linkedHMM predict
1051Phosphothreonine(CDK)HMM predict
1051Phosphothreonine(PKA)HMM predict
1051Phosphothreonine(MAPK)HMM predict
1161Phosphothreonine(PKC)HMM predict
1211Phosphoserine(CDC2)HMM predict
1211PhosphoserineHMM predict
1276LysineHMM predict
1278N-linkedHMM predict
1283Phosphoserine(PKG)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_033655
  • Location:chr9 39062765-39278299
  • strand:-
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
TAF k562GSE8489 39045166 39045381 215 17492
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ER MCF7GSE19013 39184888 39185541 653 0
GABP k562GSE8489 39067605 39067895 290 0
H3K27me3 colorectalcancer 39276167 39276825 658 0
H3K27me3 colorectalcancer 39277460 39278037 577 0
H3ac HepG2E 39277677 39278144 467 0
Oct1 H2O2-HelaGSE14283 39164047 39164077 30 0
Oct1 H2O2-HelaGSE14283 39266795 39266832 37 0
Oct1 HelaGSE14283 39266800 39266851 51 0
P300 T30-glioblastomaGSE21026 39188049 39188530 481 0
USF1 HepG2E 39270326 39270748 422 0
hScc1 BcellGSE12603 39122768 39123129 361 0
hScc1 BcellGSE12603 39139643 39140003 360 0
hScc1 BcellGSE12603 39277852 39278535 683 0
hScc1 CdLSGSE12603 39139643 39140154 511 0
hScc1 G2GSE9613 39139643 39140003 360 0
hScc1 G2GSE9613 39276058 39276942 884 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
26440 EST chr9 39129761 39131442 1681 mRNA CNTNAP3 chr9 39062765 39278300 Non-exonic Bidirectional (NOB) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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