AutismKB 2.0

Annotation Detail for PHF17


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Basic Information Top
Gene Symbol:PHF17 ( FLJ22479,JADE1,KIAA1807 )
Gene Full Name: PHD finger protein 17
Band: 4q26-q27
Quick LinksEntrez ID:79960; OMIM: 610514; Uniprot ID:JADE1_HUMAN; ENSEMBL ID: ENSG00000077684; HGNC ID:
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
8Phosphoserine.
9Phosphoserine.
10Phosphoserine.
13Phosphoserine.
89Phosphoserine.
92Phosphothreonine.
603Phosphoserine.
743Phosphoserine.
Location(AA) Modifications Resource
8Phosphoserine.Swiss-Prot 53.0
9Phosphoserine.Swiss-Prot 53.0
10Phosphoserine.Swiss-Prot 53.0
13Phosphoserine.Swiss-Prot 53.0
Location(AA) Modification Resource
13Phosphoserine(CK1)HMM predict
16N-linkedHMM predict
18Phosphoserine(CK1)HMM predict
21O-linkedHMM predict
24Phosphoserine(IKK)HMM predict
35Phosphoserine(PKB)HMM predict
35Phosphoserine(PKC)HMM predict
69SulfotyrosineHMM predict
69Phosphotyrosine(Syk)HMM predict
89Phosphoserine(CDC2)HMM predict
89Phosphoserine(ATM)HMM predict
89O-linkedHMM predict
121Phosphoserine(CK2)HMM predict
128Phosphotyrosine(Jak)HMM predict
183Phosphotyrosine(INSR)HMM predict
211Phosphoserine(CDC2)HMM predict
258S-palmitoylHMM predict
293Phosphoserine(CDC2)HMM predict
414Phosphoserine(CAMK2)HMM predict
504N-linkedHMM predict
507Phosphotyrosine(SRC)HMM predict
510Phosphothreonine(PKC)HMM predict
544O-linkedHMM predict
545Phosphoserine(IKK)HMM predict
548Phosphoserine(CK1)HMM predict
549Phosphoserine(CK2)HMM predict
549Phosphoserine(CDC2)HMM predict
559Phosphoserine(CDC2)HMM predict
603Phosphoserine(CDC2)HMM predict
688Phosphothreonine(PKA)HMM predict
703Phosphoserine(MAPK)HMM predict
703O-linkedHMM predict
713Phosphothreonine(PKC)HMM predict
722N-linkedHMM predict
731N-linkedHMM predict
739Phosphothreonine(PKC)HMM predict
739O-linkedHMM predict
740Phosphothreonine(CDC2)HMM predict
743Phosphoserine(CDK)HMM predict
743Phosphoserine(CDC2)HMM predict
778Phosphotyrosine(Jak)HMM predict
792Phosphoserine(PKG)HMM predict
803Phosphotyrosine(INSR)HMM predict
810Phosphoserine(CK1)HMM predict
810Phosphoserine(CK2)HMM predict
812Phosphoserine(CK1)HMM predict
814Phosphoserine(CK2)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_024900
  • Location:chr4 129950228-130005234
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 129942272 129942601 329 7792
Oct1 H2O2-HelaGSE14283 129942244 129942279 35 7967
Oct1 HelaGSE14283 129942226 129942278 52 7977
Oct4 hESGSE21916 129943226 129943851 625 6690
TFAP2C MCF7GSE21234 129950003 129950385 382 35
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
AR prostate-cancerGSE14092 129985027 129986144 1117 0
CTCF CD4GSE12889 129950145 129950394 249 0
CTCF CD4GSE12889 130004186 130004428 242 0
CTCF CD4SISSRdata 129950145 129950394 249 0
CTCF CD4SISSRdata 130004186 130004428 242 0
CTCF G2GSE9613 129949927 129950777 850 0
CTCF G2GSE9613 129951758 129952835 1077 0
CTCF G2GSE9613 129978379 129978560 181 0
CTCF G2GSE9613 129982437 129982630 193 0
CTCF G2GSE9613 130003313 130004694 1381 0
H3K4me3 colorectalcancer 129950850 129951312 462 0
H3K4me3 colorectalcancer 129953114 129953983 869 0
H3ac HepG2E 129950655 129951758 1103 0
H3ac HepG2E 129953302 129953983 681 0
NFkBII GM12878GSE19485 130002717 130004551 1834 0
NFkBII GM12892GSE19485 130002498 130004071 1573 0
Nanog ESGSE20650 129971869 129972700 831 0
Nanog hESGSE18292 129971841 129972716 875 0
Oct1 H2O2-HelaGSE14283 129959054 129959099 45 0
Oct1 HelaGSE14283 129981197 129981235 38 0
PHF8 293TGSE20725 129951168 129953009 1841 0
PolII HeLaGSE12783 129949879 129953657 3778 0
Rb QuiescentGSE19898 129953253 129953455 202 0
TAF HelaGSE8489 129950655 129951448 793 0
TFAP2C MCF7GSE21234 129952616 129952961 345 0
hScc1 BcellGSE12603 129949962 129950618 656 0
hScc1 BcellGSE12603 129951121 129951563 442 0
hScc1 BcellGSE12603 129952709 129953302 593 0
hScc1 BcellGSE12603 130003448 130004461 1013 0
hScc1 CdLSGSE12603 129950006 129951312 1306 0
hScc1 G2GSE9613 129950042 129950777 735 0
hScc1 G2GSE9613 129951690 129952877 1187 0
hScc1 G2GSE9613 130003474 130004694 1220 0
p130 QuiescentGSE19898 129953028 129953700 672 0
p130 SenescentGSE19898 129952419 129953590 1171 0
p130 shRbQuiescentGSE19898 129952987 129953687 700 0
p130 shRbSenescentGSE19898 129952279 129953632 1353 0
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-miR-155 hsa-mir-155 21 17881434
hsa-miR-155* hsa-mir-155 21 17881434
ID in Tarbase Data Type Support Type miRNA Gene Direct Support Publication
479 Unknown FALSE miR-155 PHF17 Reporter assay 17881434
Ensembl Protein Type Differentially expressed in Pathology or Event Mis Regulation Gene Expression Tumour Involvement
ENSG00000077684 "activated B and T cells - B-cell development, smooth muscle, endothelium" B-cell lymphomas up regulated lymphocyte "benign tumour, malignant tumour, carcinoma, leukaemia, sarcoma"
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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