AutismKB 2.0

Annotation Detail for GLRA3


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Basic Information Top
Gene Symbol:GLRA3 ( - )
Gene Full Name: glycine receptor, alpha 3
Band: 4q34.1
Quick LinksEntrez ID:8001; OMIM: 600421; Uniprot ID:GLRA3_HUMAN; ENSEMBL ID: ENSG00000145451; HGNC ID: 4328
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
71N-linked (GlcNAc...) (Potential).
382Phosphoserine.
Location(AA) Modifications Resource
71N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
Location(AA) Modification Resource
42Phosphoserine(IKK)HMM predict
71N-linkedHMM predict
75N-linkedHMM predict
295O-linkedHMM predict
303O-linkedHMM predict
306Phosphoserine(PKA)HMM predict
312Phosphotyrosine(Jak)HMM predict
356N-linkedHMM predict
382Phosphoserine(PKA)HMM predict
399Phosphothreonine(CDC2)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_001042543
  • Location:chr4 175799772-175987039
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
NRSF mAbJurkat 175985744 175988474 2730 70
NRSF mAbJurkat 175988788 175990633 1845 2671
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 175790016 175790172 156 9679
CTCF CD4SISSRdata 175790016 175790172 156 9679
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 175842773 175843044 271 0
Fos K562GSE19551 175839268 175840131 863 0
Myc K562GSE19551 175812313 175812796 483 0
NRSF JurkatGSE13047 175986283 175987489 1206 0
NRSF JurkatSISSRdata 175986308 175987169 861 0
NRSF-mono JurkatQuESTdata 175986319 175987220 901 0
NRSF-poly JurkatQuESTdata 175986331 175987369 1038 0
Nanog ESGSE20650 175936488 175936622 134 0
P300 T0-glioblastomaGSE21026 175906760 175907322 562 0
P300 T30-glioblastomaGSE21026 175906647 175907179 532 0
RUNX JurkatGSE17954 175860965 175861039 74 0
p63 keratinocytesGSE17611 175829949 175830551 602 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018