AutismKB 2.0

Annotation Detail for PHC3


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:PHC3 ( DKFZp313K1221,EDR3,FLJ12729,FLJ12967,HPH3,MGC88144 )
Gene Full Name: polyhomeotic homolog 3 (Drosophila)
Band: 3q26.2
Quick LinksEntrez ID:80012; OMIM: NA; Uniprot ID:PHC3_HUMAN; ENSEMBL ID: ENSG00000173889; HGNC ID: 15682
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
229Phosphoserine.
263Phosphoserine.
272Phosphoserine.
274Phosphoserine.
315Phosphoserine.
609Phosphothreonine.
614Phosphothreonine.
616Phosphoserine.
720HD1.
761Phosphoserine.
762Phosphoserine.
Location(AA) Modifications Resource
263Phosphoserine.Swiss-Prot 53.0
263PhosphoserinePhospho.ELM 6.0
315PhosphoserinePhospho.ELM 6.0
609Phosphothreonine.Swiss-Prot 53.0
609PhosphothreoninePhospho.ELM 6.0
616Phosphoserine.Swiss-Prot 53.0
616PhosphoserinePhospho.ELM 6.0
Location(AA) Modification Resource
10O-linkedHMM predict
11Phosphoserine(IKK)HMM predict
13O-linkedHMM predict
13Phosphoserine(IKK)HMM predict
14O-linkedHMM predict
15O-linkedHMM predict
17O-linkedHMM predict
17Phosphoserine(IKK)HMM predict
18O-linkedHMM predict
18O-linkedHMM predict
18O-linkedHMM predict
19O-linkedHMM predict
23O-linkedHMM predict
28O-linkedHMM predict
69Phosphotyrosine(Jak)HMM predict
91Phosphoserine(CK1)HMM predict
91Phosphoserine(ATM)HMM predict
95Phosphoserine(IKK)HMM predict
104O-linkedHMM predict
105O-linkedHMM predict
109O-linkedHMM predict
109O-linkedHMM predict
111O-linkedHMM predict
111Phosphoserine(CDC2)HMM predict
111Phosphoserine(CDK)HMM predict
113O-linkedHMM predict
115Phosphoserine(CK1)HMM predict
121Phosphoserine(IKK)HMM predict
123Phosphoserine(CK1)HMM predict
123Phosphoserine(ATM)HMM predict
126Phosphoserine(IKK)HMM predict
128N-linkedHMM predict
130O-linkedHMM predict
131O-linkedHMM predict
132Phosphoserine(CDC2)HMM predict
132Phosphoserine(CDK)HMM predict
134O-linkedHMM predict
134Phosphothreonine(MAPK)HMM predict
140O-linkedHMM predict
142Phosphoserine(ATM)HMM predict
145O-linkedHMM predict
145O-linkedHMM predict
146O-linkedHMM predict
146Phosphoserine(CK1)HMM predict
147Phosphoserine(CK1)HMM predict
149O-linkedHMM predict
149Phosphoserine(CK1)HMM predict
149Phosphoserine(IKK)HMM predict
151Phosphoserine(PKA)HMM predict
151Phosphoserine(IKK)HMM predict
165O-linkedHMM predict
169Phosphoserine(CAMK2)HMM predict
169Phosphoserine(ATM)HMM predict
169Phosphoserine(IKK)HMM predict
187O-linkedHMM predict
187Phosphothreonine(PKC)HMM predict
201O-linkedHMM predict
208Phosphoserine(IKK)HMM predict
215N-linkedHMM predict
229Phosphoserine(ATM)HMM predict
238O-linkedHMM predict
238Phosphoserine(CK1)HMM predict
238Phosphoserine(IKK)HMM predict
242O-linkedHMM predict
242Phosphoserine(IKK)HMM predict
248N-linkedHMM predict
258Phosphoserine(ATM)HMM predict
263Phosphoserine(ATM)HMM predict
263Phosphoserine(IKK)HMM predict
283O-linkedHMM predict
298O-linkedHMM predict
315Phosphoserine(MAPK)HMM predict
318O-linkedHMM predict
341N-linkedHMM predict
365O-linkedHMM predict
380O-linkedHMM predict
383O-linkedHMM predict
385Phosphoserine(IKK)HMM predict
387N-linkedHMM predict
389Phosphoserine(ATM)HMM predict
399O-linkedHMM predict
399Phosphoserine(CDC2)HMM predict
405Phosphoserine(CDC2)HMM predict
405Phosphoserine(IKK)HMM predict
407O-linkedHMM predict
407Phosphoserine(IKK)HMM predict
409Phosphoserine(CDC2)HMM predict
409Phosphoserine(ATM)HMM predict
427O-linkedHMM predict
461Phosphoserine(CDC2)HMM predict
461Phosphoserine(MAPK)HMM predict
495Phosphoserine(CDC2)HMM predict
501O-linkedHMM predict
506O-linkedHMM predict
508O-linkedHMM predict
508Phosphoserine(MAPK)HMM predict
508Phosphoserine(ATM)HMM predict
567O-linkedHMM predict
616O-linkedHMM predict
616Phosphoserine(CDC2)HMM predict
653Phosphoserine(CDC2)HMM predict
661O-linkedHMM predict
676Phosphoserine(IKK)HMM predict
677N-linkedHMM predict
679O-linkedHMM predict
753N-linkedHMM predict
754N-linkedHMM predict
760N-linkedHMM predict
762Phosphoserine(CK1)HMM predict
842Phosphoserine(PKA)HMM predict
842Phosphoserine(PKB)HMM predict
842PhosphoserineHMM predict
873O-linkedHMM predict
873Phosphoserine(CK1)HMM predict
886Phosphoserine(PKC)HMM predict
886Phosphoserine(CAMK2)HMM predict
886PhosphoserineHMM predict
975AlanineHMM predict
977IsoleucineHMM predict
979SerineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_024947
  • Location:chr3 171297351-171382209
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T0-glioblastomaGSE21026 171398116 171398731 615 16214
CBP T30-glioblastomaGSE21026 171398316 171398928 612 16413
CTCF CD4GSE12889 171389700 171389952 252 7617
CTCF CD4SISSRdata 171389700 171389952 252 7617
CTCF G2GSE9613 171389739 171390663 924 7992
Fos K562GSE19551 171397263 171397695 432 15270
Nanog hESGSE18292 171389735 171389882 147 7599
USF1 HepG2E 171380974 171383723 2749 139
hScc1 CdLSGSE12603 171389739 171390235 496 7778
hScc1 G2GSE9613 171389739 171390160 421 7740
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
p63 keratinocytesGSE17611 171296181 171296654 473 934
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 171381333 171382438 1105 0
FoxA1 MCF7MACSdata 171379246 171379385 139 0
H3K4me2 HCT116GSE10453 171380974 171381517 543 0
H3K4me3 colorectalcancer 171380974 171381517 543 0
H3ac HepG2E 171379396 171379954 558 0
H3ac HepG2E 171380274 171380590 316 0
H3ac HepG2E 171380974 171381697 723 0
Myc K562GSE19551 171332860 171333342 482 0
PHF8 293TGSE20725 171381490 171382646 1156 0
PHF8 HeLaGSE20725 171381172 171382391 1219 0
PHF8 Hs68minusFBSGSE20725 171381028 171382574 1546 0
PHF8 Hs68plusFBSGSE20725 171380797 171382591 1794 0
RARA MCF7GSE15244 171381056 171381517 461 0
TAF HelaGSE8489 171380974 171381594 620 0
TAF k562GSE8489 171380974 171381557 583 0
TAFII hESGSE17917 171381916 171382415 499 0
hScc1 BcellGSE12603 171339215 171339391 176 0
hScc1 BcellGSE12603 171381056 171382188 1132 0
p130 shRbQuiescentGSE19898 171381082 171381691 609 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


Copyright © 2017, Center for Bioinformatics , Peking University | All Rights Reserved