Annotation Detail for CSRNP3

View Evidences	View Variants	View Annotations

Basic Information Top

Gene Symbol:	CSRNP3 ( FAM130A2,FLJ11703,FLJ32093,FLJ44141,TAIP-2,TAIP2 )
Gene Full Name:	cysteine-serine-rich nuclear protein 3
Band:	2q24.3
Quick Links	Entrez ID:80034; OMIM: NA; Uniprot ID:CSRN3_HUMAN; ENSEMBL ID: ENSG00000178662; HGNC ID: 30729
Relate to Another Database:	SFARIGene; denovo-db

Pathways, Diseases and Drugs

TF binding site

Post Translation Modification

PTM Sites from Uniprot:2 results
Experimental PTM Sites from dbPTM:0 results
Predicted PTM Sites by profile HMM from dbPTM:0 results

Location(AA)	Modification
561	Phosphoserine.
563	Phosphoserine.

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

RefSeq ID: NM_024969
Location:chr2 166137135-166245448
strand:+

Upstream the gene:4 results
Downstream the gene:4 results
Inside the gene:9 results

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
NRSF	Jurkat	SISSRdata	166128356	166128491	135	8712
NRSF-mono	Jurkat	QuESTdata	166128367	166128559	192	8673
NRSF-poly	Jurkat	QuESTdata	166128320	166128494	174	8729
Oct1	Hela	GSE14283	166133066	166133127	61	4039

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	G2	GSE9613	166263413	166263624	211	18070
GABP	k562	GSE8489	166262418	166262828	410	17175
Oct1	Hela	GSE14283	166259676	166259709	33	14244
hScc1	G2	GSE9613	166263270	166263624	354	17999

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
ER	Fulvestrant-MCF7	GSE14664	166203717	166203750	33	0
Nanog	hES	GSE18292	166145402	166145904	502	0
Oct1	Hela	GSE14283	166142543	166142577	34	0
Oct1	Hela	GSE14283	166182553	166182607	54	0
Oct1	Hela	GSE14283	166203719	166203749	30	0
Oct1	Hela	GSE14283	166230735	166230770	35	0
Oct1	Hela	GSE14283	166242102	166242130	28	0
TAF	Hela	GSE8489	166158013	166158544	531	0
p63	keratinocytes	GSE17611	166167068	166167519	451	0

Validated miRNA targets

Cis-Nats regulation

Simple Query:

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

Studies: 1,036
Genes: 1,379
CNVs/SVs: 5,420
SNVs/Indels: 11,669
de novo Mutations: 5,669
Mosaics: 789
Linkage Regions: 172

Paper Collected: 6/30/2018

Last Update: 8/26/2018

Copyright © 2017, Center for Bioinformatics , Peking University | All Rights Reserved