AutismKB 2.0

Annotation Detail for LRRTM4


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Basic Information Top
Gene Symbol:LRRTM4 ( FLJ12568,MGC120633,MGC120636 )
Gene Full Name: leucine rich repeat transmembrane neuronal 4
Band: 2p12
Quick LinksEntrez ID:80059; OMIM: 610870; Uniprot ID:LRRT4_HUMAN; ENSEMBL ID: ENSG00000176204; HGNC ID: 19411
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
58N-linked (GlcNAc...) (Potential).
126N-linked (GlcNAc...) (Potential).
291N-linked (GlcNAc...) (Potential).
Location(AA) Modifications Resource
58N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
126N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
291N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
Location(AA) Modification Resource
63Phosphoserine(ATM)HMM predict
98Phosphoserine(CK2)HMM predict
99Phosphoserine(CK2)HMM predict
126N-linkedHMM predict
147Phosphothreonine(PKC)HMM predict
245Phosphoserine(ATM)HMM predict
377Phosphothreonine(CDC2)HMM predict
401Phosphothreonine(CDC2)HMM predict
401O-linkedHMM predict
401Phosphothreonine(MAPK)HMM predict
403Phosphoserine(MAPK)HMM predict
403Phosphoserine(CDK)HMM predict
403Phosphoserine(CDC2)HMM predict
405Phosphoserine(CDC2)HMM predict
405O-linkedHMM predict
417Phosphotyrosine(Syk)HMM predict
417Phosphotyrosine(SRC)HMM predict
417Phosphotyrosine(EGFR)HMM predict
417SulfotyrosineHMM predict
485Phosphotyrosine(Syk)HMM predict
485SulfotyrosineHMM predict
501N-linkedHMM predict
509O-linkedHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_024993
  • Location:chr2 77597301-77603009
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Oct4 hESGSE21916 77603413 77603987 574 691
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Oct1 HelaGSE14283 77587414 77587442 28 9874
No data
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018